RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TMEM202A6NGA9 273 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SMIM9A6NGZ8 99 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SHISA7A6NL88 538 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 H3BQ85 93 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SAP30O75446 220 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 NDUFB8O95169 186 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 EFEMP2O95967 443 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 NAPSAO96009 420 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 ELNP15502 786 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 PRTN3P24158 256 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 S100A4P26447 101 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 TNFRSF4P43489 277 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 FHL5Q5TD97 284 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 TMEM42Q69YG0 159 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SLC25A47Q6Q0C1 308 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CBLN3Q6UW01 205 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 PPP1R32Q7Z5V6 425 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 DTX2Q86UW9 622 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 PIFOQ8TCI5 191 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 FOXB1Q99853 325 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SPAG8Q99932 426 aaPredicted RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 DECR2Q9NUI1 292 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 PCM1Q15154 2024 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 IGLL5B9A064 214 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 LINC01619G3V211 115 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 M0QXV9 152 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SLC25A20O43772 301 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CEACAM5P06731 702 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SCTP09683 121 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CXCL5P42830 114 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CXCL12P48061 93 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 QRFPP83859 136 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 FOXF1Q12946 379 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CXCL17Q6UXB2 119 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 SPATA12Q7Z6I5 190 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 MRPL55Q7Z7F7 128 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 SRSF12Q8WXF0 261 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 PRDM14Q9GZV8 571 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 ZNF355PQ9NSJ1 428 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 V9GYV3 84 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 ZNF106Q9H2Y7 1883 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 TRAV13-1A0A0B4J241 112 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 NPIPB5A8MRT5 1133 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 NPIPB6E9PJ23 425 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CRXO43186 299 aaPredicted RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 LYPD3O95274 346 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 CA6P23280 308 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 RPL8P62917 257 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 RBMY1FQ15415 496 aaKnown RBP1.84□□□□□ -2.11
USP53-202ENST00000450251 C12orf74Q32Q52 190 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 LYPD1Q8N2G4 141 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 OR13A1Q8NGR1 328 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 RNF138Q8WVD3 245 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 NRGNQ92686 78 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 KIR2DL4Q99706 377 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 HCFC1R1Q9NWW0 138 aa1.84□□□□□ -2.11
USP53-202ENST00000450251 H3BT86 120 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 SYNGR3O43761 229 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 FOLR3P41439 243 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 LYZP61626 148 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 PDE6HQ13956 83 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 LY6DQ14210 128 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 PDCD1Q15116 288 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 RNPS1Q15287 305 aaKnown RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 C3AR1Q16581 482 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 PIGYQ3MUY2 71 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 ETDBQ3ZM63 59 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 TMEM78Q5T7P6 136 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 SPANXN1Q5VSR9 72 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 DEFB132Q7Z7B7 95 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 ZPLD1Q8TCW7 415 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 NAT6Q93015 286 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 RASL10BQ96S79 203 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 A0A0B4J2C4 111 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 ZNF785A8K8V0 405 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 SNAI2O43623 268 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 ZG16O60844 167 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 NDUFA7O95182 113 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 IGHV4-34P06331 123 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 RPS27P42677 84 aaKnown RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 TNFAIP6P98066 277 aaPredicted RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 ATP5EP2Q5VTU8 51 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 FAM53AQ6NSI3 398 aaPredicted RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 INO80CQ6PI98 192 aaPredicted RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 Q6ZSR6 202 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 ASCL5Q7RTU5 278 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 RNF182Q8N6D2 247 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 COX14Q96I36 57 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 TMEM141Q96I45 108 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 RNASE7Q9H1E1 156 aaKnown RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 RPUSD1Q9UJJ7 312 aaKnown RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 TDRD15B5MCY1 1934 aaKnown RBP1.84□□□□□ -2.12
USP53-202ENST00000450251 PLXNB2O15031 1838 aa1.84□□□□□ -2.12
USP53-202ENST00000450251 TRBV20OR9-2A0A075B6H5 130 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LILRA5A6NI73 299 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LYRM9A8MSI8 78 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CGAP01215 116 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 HOXB2P14652 356 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 SYNJ2BPP57105 145 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms