RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
UBE3B-204ENST00000449510 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
UBE3B-204ENST00000449510 TNFRSF19Q9NS68 423 aa10.26□□□□□ -0.77
UBE3B-204ENST00000449510 NUP210Q8TEM1 1887 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-204ENST00000449510 NKX6-3A6NJ46 265 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 K7EN84 100 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 IGLL1P15814 213 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
UBE3B-204ENST00000449510 Q0VFX4 171 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 DEFB109BQ30KR1 87 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 DNLZQ5SXM8 178 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 COQ2Q96H96 371 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 GNG7O60262 68 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 SNRNP40Q96DI7 357 aaKnown RBP10.25□□□□□ -0.77
UBE3B-204ENST00000449510 PYGO2Q9BRQ0 406 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 GFRA3O60609 400 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-204ENST00000449510 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-204ENST00000449510 TMEM105Q8N8V8 129 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 AP5S1Q9NUS5 200 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
UBE3B-204ENST00000449510 TRBV9A0A0B4J1U6 114 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 PEX7O00628 323 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 IGLV3-19P01714 112 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 ORM1P02763 201 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 HBBP68871 147 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 MORN2Q502X0 79 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 TDHQ8IZJ6 230 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 PCED1AQ9H1Q7 454 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 KIR2DL5BA0A0G2JN68 375 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 KIR2DL5BA0A0G2JPC4 375 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 TYMSP04818 313 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 CLDN18P56856 261 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 B3GALT5-AS1P59052 145 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 CX3CL1P78423 397 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 COA6Q5JTJ3 125 aaKnown RBP10.24□□□□□ -0.77
UBE3B-204ENST00000449510 KIR2DL5AQ8N109 375 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 SAA2-SAA4A0A096LPE2 208 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 NBEAP1P0C6P0 100 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 SAA2P0DJI9 122 aaPredicted RBP10.24□□□□□ -0.77
UBE3B-204ENST00000449510 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
UBE3B-204ENST00000449510 VMA21Q3ZAQ7 101 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 WDR82Q6UXN9 313 aa10.24□□□□□ -0.77
UBE3B-204ENST00000449510 C7orf71A4D174 169 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 CECR9P0C854 216 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 WDR86Q86TI4 376 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 OR52E5Q8NH55 327 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 SARAFQ96BY9 339 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 FAM214BQ7L5A3 538 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 GUCD1Q96NT3 240 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 KLK15Q9H2R5 256 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 A6NDN8 102 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 CCL3L1P16619 93 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-204ENST00000449510 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
UBE3B-204ENST00000449510 IGHV3OR16-13A0A075B7E8 117 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 IGHV3-74A0A0B4J1X5 117 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 K7ESF4 209 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 IGHV1-2P23083 117 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 ADTRPQ96IZ2 230 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 FRYQ5TBA9 3013 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 IGKV3-7A0A075B6H7 116 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 TEX43Q6ZNM6 134 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 PERPQ96FX8 193 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 GAL3ST2Q9H3Q3 398 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 KIAA1549Q9HCM3 1950 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 IGKV1-16P04430 117 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 TDGF1P13385 188 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 MBNL2Q5VZF2 373 aaKnown RBP10.22□□□□□ -0.77
UBE3B-204ENST00000449510 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 OSTCQ9NRP0 149 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 ADAMTS9Q9P2N4 1935 aa10.22□□□□□ -0.77
UBE3B-204ENST00000449510 NKX2-8O15522 239 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 GPR183P32249 361 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 KIR2DS2P43631 304 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 INO80CQ6PI98 192 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-204ENST00000449510 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 PEF1Q9UBV8 284 aaKnown RBP10.21□□□□□ -0.77
UBE3B-204ENST00000449510 NAV3Q8IVL0 2385 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 NCBP2LA6PVI3 153 aaKnown RBP10.21□□□□□ -0.77
UBE3B-204ENST00000449510 CLEC3BP05452 202 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 YPEL3P61236 119 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-204ENST00000449510 SMAGPQ0VAQ4 97 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 VWC2Q2TAL6 325 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 C11orf1Q9H5F2 150 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 ZNF430Q9H8G1 570 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms