RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 ACOT7LQ6ZUV0 252 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 TMEM217Q8N7C4 229 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 AQP10Q96PS8 301 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 HSPB11Q9Y547 144 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 S100A11P31949 105 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
SHANK2-210ENST00000449116 DLK1P80370 383 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 SLC38A11Q08AI6 406 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 MLANAQ16655 118 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 ZNF502Q8TBZ5 544 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 SLC35E1Q96K37 410 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
SHANK2-210ENST00000449116 GGACTQ9BVM4 153 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
SHANK2-210ENST00000449116 S4R3C0 116 aa11.35□□□□□ -0.59
SHANK2-210ENST00000449116 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 IGHV3-48P01763 117 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
SHANK2-210ENST00000449116 MFAP4P55083 255 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 ZNF343Q6P1L6 599 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 LILRB2Q8N423 598 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 OR1S2Q8NGQ3 325 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 OR5C1Q8NGR4 320 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 BSCL2Q96G97 398 aaPredicted RBP11.34□□□□□ -0.59
SHANK2-210ENST00000449116 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 TXN2Q99757 166 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
SHANK2-210ENST00000449116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.33□□□□□ -0.6
SHANK2-210ENST00000449116 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 LGALS1P09382 135 aaKnown RBP11.33□□□□□ -0.6
SHANK2-210ENST00000449116 NPBWR1P48145 328 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 GAMTQ14353 236 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 ATP6V1FQ16864 119 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 Q56UQ5 140 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 UBAC2Q8NBM4 344 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 OR5B12Q96R08 314 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 CITED1Q99966 193 aa11.33□□□□□ -0.6
SHANK2-210ENST00000449116 GAR1Q9NY12 217 aaKnown RBP11.33□□□□□ -0.6
SHANK2-210ENST00000449116 MRPL36Q9P0J6 103 aaKnown RBP11.33□□□□□ -0.6
SHANK2-210ENST00000449116 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-210ENST00000449116 CLN5O75503 358 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 RND2P52198 227 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-210ENST00000449116 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 OR2F1Q13607 317 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 ZNF345Q14585 488 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 CLINT1Q14677 625 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 TMEM147Q9BVK8 224 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 UQCC1Q9NVA1 299 aa11.32□□□□□ -0.6
SHANK2-210ENST00000449116 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 I3L521 148 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 GNG7O60262 68 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 DFFBO76075 338 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 CLEC3BP05452 202 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 GPR183P32249 361 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 EIF2B2P49770 351 aaKnown RBP11.31□□□□□ -0.6
SHANK2-210ENST00000449116 RUNX1Q01196 453 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 VWC2Q2TAL6 325 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 NDUFA11Q86Y39 141 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 NPIPB3Q92617 1050 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 ATP5SQ99766 215 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 SMIM3Q9BZL3 60 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
SHANK2-210ENST00000449116 FBXL17Q9UF56 701 aa11.31□□□□□ -0.6
SHANK2-210ENST00000449116 FBN1P35555 2871 aaKnown RBP11.3□□□□□ -0.6
SHANK2-210ENST00000449116 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 A0A0D9SG52 128 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 ANKRD34BA5PLL1 514 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 TGOLN2O43493 480 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
SHANK2-210ENST00000449116 CXCL2P19875 107 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms