RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RELQ04864 619 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 TOMM20LQ6UXN7 152 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 DUSP18Q8NEJ0 188 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 C20orf24Q9BUV8 137 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 NDUFA13Q9P0J0 144 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 HSPB7Q9UBY9 170 aa10.5□□□□□ -0.73
RTFDC1-204ENST00000449062 A0A1B0GU03 582 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 CORTO00230 105 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 CHEK1O14757 476 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 GNG7O60262 68 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 PITX3O75364 302 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 CLN5O75503 358 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 IGKV1-17P01599 117 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 SULT1A3P0DMM9 295 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 SULT1A4P0DMN0 295 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 CCR6P51684 374 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 FAM90A2PQ658T7 463 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 LGI3Q8N145 548 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 LILRB2Q8N423 598 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 SPAG8Q99932 426 aaPredicted RBP10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 RHPN1-AS1Q9BWJ2 59 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 HEYLQ9NQ87 328 aaPredicted RBP10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 TENM2Q9NT68 2774 aa10.49□□□□□ -0.73
RTFDC1-204ENST00000449062 SRPXP78539 464 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 TNFRSF9Q07011 255 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 SMCO1Q147U7 214 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 TMEM116Q8NCL8 245 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 OR52B4Q8NGK2 314 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 RNF2Q99496 336 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 SRD5A3Q9H8P0 318 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 EDA2RQ9HAV5 297 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 DYNC2H1Q8NCM8 4307 aaKnown RBP10.48□□□□□ -0.73
RTFDC1-204ENST00000449062 CSMD3Q7Z407 3707 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 RYR3Q15413 4870 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 YIF1AO95070 293 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 NXPH3O95157 252 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 APOHP02749 345 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 ANXA3P12429 323 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 LAMTOR1Q6IAA8 161 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 ZNF600Q6ZNG1 722 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 TMED4Q7Z7H5 227 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 PUS1Q9Y606 427 aaKnown RBP eCLIP10.47□□□□□ -0.73
RTFDC1-204ENST00000449062 IGHV3-49A0A0A0MS15 119 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 SFT2D2O95562 160 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 SLC25A6P12236 298 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 BTCP35070 178 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 PPP1R1AQ13522 171 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 SLC24A4Q8NFF2 622 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 RBKSQ9H477 322 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 U3KQ87 197 aa10.46□□□□□ -0.73
RTFDC1-204ENST00000449062 IGHV3OR16-13A0A075B7E8 117 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 IGHV3-74A0A0B4J1X5 117 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 NAP1L6A6NFF2 107 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 C3orf84H3BNL1 204 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 NDUFB6O95139 128 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 IGLC1P0CG04 106 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 OPRK1P41145 380 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 U3KQE9 123 aa10.45□□□□□ -0.74
RTFDC1-204ENST00000449062 TRAV30A0A087WSZ9 112 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 PLA2G10O15496 165 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 SLC25A4P12235 298 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 VAMP1P23763 118 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 NPY1RP25929 384 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 CRYBB3P26998 211 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 UBE2MP61081 183 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 RBMS2Q15434 407 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 TIGITQ495A1 244 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 CENPSQ8N2Z9 138 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 RETNQ9HD89 108 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 FLVCR2Q9UPI3 526 aa10.44□□□□□ -0.74
RTFDC1-204ENST00000449062 PIGBOS1A0A0B4J2F0 54 aa10.43□□□□□ -0.74
RTFDC1-204ENST00000449062 RPS10-NUDT3A0A1W2PQS6 291 aa10.43□□□□□ -0.74
RTFDC1-204ENST00000449062 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
RTFDC1-204ENST00000449062 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms