RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 WIPF2Q8TF74 440 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-203ENST00000449049 MFFQ9GZY8 342 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 NUPL2O15504 423 aaKnown RBP10.96□□□□□ -0.65
SHMT2-203ENST00000449049 PSMB8P28062 276 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 OR2F1Q13607 317 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 OR8G2PQ6IF36 304 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 TMUB2Q71RG4 321 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 OR10P1Q8NGE3 313 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 MISP3Q96FF7 219 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 BSCL2Q96G97 398 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-203ENST00000449049 ZNF355PQ9NSJ1 428 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 THYN1Q9P016 225 aa10.96□□□□□ -0.65
SHMT2-203ENST00000449049 I3L2K1 104 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 OR2J3O76001 311 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 HBG1P69891 147 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 HBG2P69892 147 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 CD69Q07108 199 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 FOXE3Q13461 319 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 TEX38Q6PEX7 206 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 ALKAL2Q6UX46 152 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-203ENST00000449049 PRIMA1Q86XR5 153 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 COMMD1Q8N668 190 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 TMEM217Q8N7C4 229 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-203ENST00000449049 RNF152Q8N8N0 203 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 NECAP1Q8NC96 275 aa10.96□□□□□ -0.66
SHMT2-203ENST00000449049 PINX1Q96BK5 328 aaKnown RBP10.96□□□□□ -0.66
SHMT2-203ENST00000449049 FNDC4Q9H6D8 234 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-203ENST00000449049 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 K7EIM0 57 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 DNASE2O00115 360 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-203ENST00000449049 NDUFB8O95169 186 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 ELANEP08246 267 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 GPX4P36969 197 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-203ENST00000449049 OPRK1P41145 380 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 RHOGP84095 191 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 SLC38A11Q08AI6 406 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 KCNRGQ8N5I3 272 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 KLHDC1Q8N7A1 406 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 C12orf57Q99622 126 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 GGACTQ9BVM4 153 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
SHMT2-203ENST00000449049 FAM223BA6NKX1 122 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 F8W036 122 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 MT-CO2P00403 227 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 TRGV3P03979 118 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 PF4V1P10720 104 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-203ENST00000449049 SSTP61278 116 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 DLK1P80370 383 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-203ENST00000449049 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 CLRN3Q8NCR9 226 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 OR1S2Q8NGQ3 325 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 OR5C1Q8NGR4 320 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 CACNG8Q8WXS5 425 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 ST8SIA2Q92186 375 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 KLK15Q9H2R5 256 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 A0A0D9SG52 128 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 FNDC10F2Z333 226 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 RAB9AP51151 201 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 PROK1P58294 105 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 TPPP2P59282 170 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 DEFA5Q01523 94 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 SLC16A13Q7RTY0 426 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 MYOZ3Q8TDC0 251 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 FBXL17Q9UF56 701 aa10.94□□□□□ -0.66
SHMT2-203ENST00000449049 A0A1B0GUS0 222 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 MLANAQ16655 118 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 VWC2Q2TAL6 325 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 ATRAIDQ6UW56 229 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 SNAPINO95295 136 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 SMIM3Q9BZL3 60 aa10.93□□□□□ -0.66
SHMT2-203ENST00000449049 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
SHMT2-203ENST00000449049 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-203ENST00000449049 LCNL1Q6ZST4 164 aa10.92□□□□□ -0.66
SHMT2-203ENST00000449049 ATP5SQ99766 215 aa10.92□□□□□ -0.66
SHMT2-203ENST00000449049 TMEM147Q9BVK8 224 aa10.92□□□□□ -0.66
SHMT2-203ENST00000449049 ARL6Q9H0F7 186 aa10.92□□□□□ -0.66
SHMT2-203ENST00000449049 MRPL36Q9P0J6 103 aaKnown RBP10.92□□□□□ -0.66
SHMT2-203ENST00000449049 DFFBO76075 338 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 APOC3P02656 99 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
SHMT2-203ENST00000449049 ATP5G2Q06055 141 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 FOXL1Q12952 345 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 GAMTQ14353 236 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 CLINT1Q14677 625 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 KRTAP24-1Q3LI83 254 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 TCTEX1D4Q5JR98 221 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 OR4X2Q8NGF9 303 aa10.91□□□□□ -0.66
SHMT2-203ENST00000449049 SLC35E1Q96K37 410 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms