RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZNF696Q9H7X3 374 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 V9GYS6 101 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 A0A0G2JK05 382 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 C3orf85A0A1B0GTC6 90 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 RRHO14718 337 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 UCP1P25874 307 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 HINT1P49773 126 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR52I2Q8NH67 350 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 NUP210LQ5VU65 1888 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 LOC107984156A0A0G2JMH3 177 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 LRCOL1A6NCL2 159 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 GHRHP01286 108 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC25A4P12235 298 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 ARL17AQ8IVW1 177 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF645Q8N7E2 425 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 NDUFAF3Q9BU61 184 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 RETNQ9HD89 108 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF688P0C7X2 276 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD28P10747 220 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 GABRB1P18505 474 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 SCARB1Q8WTV0 552 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 KCNK15Q9H427 330 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 LYRM2Q9NU23 88 aaPredicted RBP4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 KAAG1Q9UBP8 84 aa4.59□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRAV8-7A0A075B6U6 113 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 H3BP45 60 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CA2P00918 260 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD3DP04234 171 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 NANOS3P60323 173 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SP6Q3SY56 376 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CIARTQ8N365 385 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF486Q96H40 463 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 NEURL2Q9BR09 285 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 HSF4Q9ULV5 492 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 ELOA3CA0A087WX78 387 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGHV1-3A0A0C4DH29 117 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A1W2PP11 408 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 BUB1B-PAK6H3BSN5 160 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD1AP06126 327 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CCR6P51684 374 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 C5orf64Q2M2E5 130 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 RPL39P5Q59GN2 51 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR11H2Q8NH07 326 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 DBX1A6NMT0 343 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 FGF16O43320 207 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SSSCA1O60232 199 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 YPEL1O60688 119 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 S100A8P05109 93 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 METTL15P1P0C7V9 234 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPANXN1Q5VSR9 72 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR4X1Q8NH49 305 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 YPEL2Q96QA6 119 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 HIGD1AQ9Y241 93 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 HSPE1P61604 102 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 FDX2Q6P4F2 183 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 PRSS45Q7RTY3 260 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM110AQ9BQ89 295 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 UQCC1Q9NVA1 299 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 PHLDA3Q9Y5J5 127 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 MAS1LP35410 378 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 TAGLN2P37802 199 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 PLP1P60201 277 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CFHR3Q02985 330 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 ACOT6Q3I5F7 207 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 TXNDC17Q9BRA2 123 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 CHRDL1Q9BU40 450 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGF1P05019 195 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLC6A1P30531 599 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 ELLP55199 621 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 DEFB131AP59861 70 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPSB4Q96A44 273 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 Q96M66 194 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 HSPB7Q9UBY9 170 aa4.58□□□□□ -1.68
CDC42BPA-209ENST00000448940 TEX48A0A1B0GUV7 120 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGHV3-53P01767 116 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TFF1P04155 84 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 SELENOTP62341 195 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 ATP6V1FQ16864 119 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 EIF4E3Q8N5X7 224 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 MRGPRFQ96AM1 343 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 RAB40CQ96S21 281 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 XCL2Q9UBD3 114 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 LSM2Q9Y333 95 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGHV3-48P01763 117 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 MELTFP08582 738 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR4E1P0C645 316 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF25P17030 456 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 CTRB1P17538 263 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 RND2P52198 227 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 CTRB2Q6GPI1 263 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNF2Q99496 336 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 HDHD3Q9BSH5 251 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM204Q9BSN7 226 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 PUS1Q9Y606 427 aaKnown RBP eCLIP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms