RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 RABAC1Q9UI14 185 aa20.69■□□□□ 0.9
CBX4-202ENST00000448310 C11orf45Q8TAV5 145 aa20.68■□□□□ 0.9
CBX4-202ENST00000448310 ABHD1Q96SE0 405 aa20.68■□□□□ 0.9
CBX4-202ENST00000448310 C11orf68Q9H3H3 251 aaKnown RBP20.68■□□□□ 0.9
CBX4-202ENST00000448310 ATG12O94817 140 aa20.67■□□□□ 0.9
CBX4-202ENST00000448310 OPRK1P41145 380 aa20.67■□□□□ 0.9
CBX4-202ENST00000448310 SUB1P53999 127 aaKnown RBP eCLIP20.67■□□□□ 0.9
CBX4-202ENST00000448310 SCGB2B2Q4G0G5 96 aa20.67■□□□□ 0.9
CBX4-202ENST00000448310 OR13C8Q8NGS7 320 aa20.67■□□□□ 0.9
CBX4-202ENST00000448310 ENY2Q9NPA8 101 aa20.67■□□□□ 0.9
CBX4-202ENST00000448310 CORTO00230 105 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 CLN5O75503 358 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 TMEM187Q14656 261 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 RBMS2Q15434 407 aaKnown RBP20.66■□□□□ 0.9
CBX4-202ENST00000448310 CCDC71LQ8N9Z2 235 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 RNASE11Q8TAA1 199 aaKnown RBP20.66■□□□□ 0.9
CBX4-202ENST00000448310 MARCH1Q8TCQ1 289 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 AP3S1Q92572 193 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 RRNAD1Q96FB5 475 aaKnown RBP20.66■□□□□ 0.9
CBX4-202ENST00000448310 VPS13DQ5THJ4 4388 aa20.66■□□□□ 0.9
CBX4-202ENST00000448310 TRAV2A0A0B4J234 112 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 TBPP20226 339 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 NPPCP23582 126 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 UCP1P25874 307 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 CTF1Q16619 201 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 Q6ZRM9 215 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 TERB2Q8NHR7 220 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 ZFAND1Q8TCF1 268 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 TMEM231Q9H6L2 316 aa20.65■□□□□ 0.9
CBX4-202ENST00000448310 ZNF182P17025 639 aaPredicted RBP20.64■□□□□ 0.89
CBX4-202ENST00000448310 LGALS9CQ6DKI2 356 aa20.64■□□□□ 0.89
CBX4-202ENST00000448310 STXBP6Q8NFX7 210 aa20.64■□□□□ 0.89
CBX4-202ENST00000448310 MFFQ9GZY8 342 aa20.64■□□□□ 0.89
CBX4-202ENST00000448310 GABARAPO95166 117 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 RAB3DO95716 219 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 CD74P04233 296 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 TIGITQ495A1 244 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 STHQ8IWL8 128 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 TMEM229BQ8NBD8 167 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 OR4X1Q8NH49 305 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 TMEM230Q96A57 120 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 METTL26Q96S19 204 aa20.63■□□□□ 0.89
CBX4-202ENST00000448310 P2RY1P47900 373 aa20.62■□□□□ 0.89
CBX4-202ENST00000448310 TAS2R19P59542 299 aa20.62■□□□□ 0.89
CBX4-202ENST00000448310 BSXQ3C1V8 233 aa20.62■□□□□ 0.89
CBX4-202ENST00000448310 FAAP20Q6NZ36 180 aa20.62■□□□□ 0.89
CBX4-202ENST00000448310 A0A1W2PS18 150 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 K7EQG2 157 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 IGKV1-17P01599 117 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 IFNA4P05014 189 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 OR5AC1P0C628 307 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 CRYBB3P26998 211 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 RPL5P46777 297 aaKnown RBP20.61■□□□□ 0.89
CBX4-202ENST00000448310 STEAP1BQ6NZ63 245 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 LHFPL5Q8TAF8 219 aa20.61■□□□□ 0.89
CBX4-202ENST00000448310 ZNF688P0C7X2 276 aa20.6■□□□□ 0.89
CBX4-202ENST00000448310 SMIM18P0DKX4 95 aa20.6■□□□□ 0.89
CBX4-202ENST00000448310 MIXL1Q9H2W2 232 aa20.6■□□□□ 0.89
CBX4-202ENST00000448310 KNCNA6PVL3 124 aa20.59■□□□□ 0.89
CBX4-202ENST00000448310 GIG44P09565 113 aaPredicted RBP20.59■□□□□ 0.89
CBX4-202ENST00000448310 SPCS3P61009 180 aa20.59■□□□□ 0.89
CBX4-202ENST00000448310 GPR107Q5VW38 600 aa20.59■□□□□ 0.89
CBX4-202ENST00000448310 TRPT1Q86TN4 253 aaKnown RBP20.59■□□□□ 0.89
CBX4-202ENST00000448310 TMEM222Q9H0R3 208 aa20.59■□□□□ 0.89
CBX4-202ENST00000448310 Q8NAQ8 132 aa20.58■□□□□ 0.89
CBX4-202ENST00000448310 RTBDNQ9BSG5 229 aaPredicted RBP20.58■□□□□ 0.89
CBX4-202ENST00000448310 DNAH6Q9C0G6 4158 aa20.58■□□□□ 0.88
CBX4-202ENST00000448310 GABARAPH6UMI1 98 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 SCGB2A1O75556 95 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 CDS2O95674 445 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 C4BPBP20851 252 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 C2CD4CQ8TF44 421 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 GLYATL2Q8WU03 294 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 C15orf40Q8WUR7 153 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 NAA60Q9H7X0 242 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 HEYLQ9NQ87 328 aaPredicted RBP20.57■□□□□ 0.88
CBX4-202ENST00000448310 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.57■□□□□ 0.88
CBX4-202ENST00000448310 CACNG5Q9UF02 275 aa20.57■□□□□ 0.88
CBX4-202ENST00000448310 C14orf166Q9Y224 244 aaKnown RBP20.57■□□□□ 0.88
CBX4-202ENST00000448310 TEX13DA0A0J9YY54 714 aaPredicted RBP20.56■□□□□ 0.88
CBX4-202ENST00000448310 B3GALNT1O75752 331 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 HTR2BP41595 481 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 AARDQ4LEZ3 155 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 FAM219AQ8IW50 185 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 SELENOHQ8IZQ5 122 aaKnown RBP20.56■□□□□ 0.88
CBX4-202ENST00000448310 OR52E5Q8NH55 327 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 DCANP1Q8TF63 244 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 GRAMD2BQ96HH9 432 aa20.56■□□□□ 0.88
CBX4-202ENST00000448310 NARS2Q96I59 477 aaKnown RBP20.56■□□□□ 0.88
CBX4-202ENST00000448310 TRAV30A0A087WSZ9 112 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 IGHV4-28A0A0C4DH34 117 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 RPS10-NUDT3A0A1W2PQS6 291 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 RGS5O15539 181 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 RBMY1A1P0DJD3 496 aaKnown RBP20.55■□□□□ 0.88
CBX4-202ENST00000448310 RBMY1CP0DJD4 496 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 RND2P52198 227 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 PRR20EP86478 221 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 PRR20CP86479 221 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 PRR20DP86480 221 aa20.55■□□□□ 0.88
CBX4-202ENST00000448310 PRR20BP86481 221 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms