RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ADIRFQ15847 76 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 RNF212Q495C1 297 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 THAP8Q8NA92 274 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 NANPQ8TBE9 248 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 EAF1Q96JC9 268 aaPredicted RBP13.91□□□□□ -0.18
SMC6-206ENST00000446852 NBR2O15453 112 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 MOSP00540 346 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 RPL23P62829 140 aaKnown RBP13.91□□□□□ -0.18
SMC6-206ENST00000446852 ELOBQ15370 118 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 Q8WTZ3 238 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 ZNF503Q96F45 646 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 SSX3Q99909 188 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 DERL1Q9BUN8 251 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 URGCP-MRPS24S4R325 110 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 CELSR2Q9HCU4 2923 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 TCRBV4S1A1TA0A5B7 111 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 C2CD4CQ8TF44 421 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 SLC25A33Q9BSK2 321 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 F11RQ9Y624 299 aaKnown RBP13.9□□□□□ -0.18
SMC6-206ENST00000446852 MAP1AP78559 2803 aaPredicted RBP13.9□□□□□ -0.18
SMC6-206ENST00000446852 CXorf65A6NEN9 183 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 NDUFA3O95167 84 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 NPBQ8NG41 125 aa13.9□□□□□ -0.18
SMC6-206ENST00000446852 NDUFB4O95168 129 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 MT-CO2P00403 227 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 MORN5Q5VZ52 161 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
SMC6-206ENST00000446852 C19orf24Q9BVV8 132 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 SPG11Q96JI7 2443 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 IGHV3-21A0A0B4J1V1 117 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 CXCL1P09341 107 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 HES1Q14469 280 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 SMUG1Q53HV7 270 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 TBX15Q96SF7 602 aa13.89□□□□□ -0.19
SMC6-206ENST00000446852 F6UZH7 168 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 CLN5O75503 358 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 TOX4O94842 621 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 TXNDC17Q9BRA2 123 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 TMEM242Q9NWH2 141 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 TECRQ9NZ01 308 aaKnown RBP13.88□□□□□ -0.19
SMC6-206ENST00000446852 DOK5Q9P104 306 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 SCO2A0A1W2PP80 73 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 CNIH1O95406 144 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 ETFRF1Q6IPR1 90 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 UBR5O95071 2799 aaPredicted RBP13.88□□□□□ -0.19
SMC6-206ENST00000446852 CELSR1Q9NYQ6 3014 aa13.88□□□□□ -0.19
SMC6-206ENST00000446852 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 PATE2Q6UY27 113 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 CCL19Q99731 98 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 DNAJC4Q9NNZ3 241 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 ZFHX3Q15911 3703 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 C1orf196B1AJZ1 125 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 CLDN34H7C241 214 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 OR7C2O60412 319 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 TMEM116Q8NCL8 245 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 OR2T10Q8NGZ9 312 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 FAM167A-AS1Q96KT0 104 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 EPG5Q9HCE0 2579 aa13.87□□□□□ -0.19
SMC6-206ENST00000446852 TRAV5A0A0B4J249 113 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 OOSP1A8MZH6 123 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 CORTO00230 105 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 PDLIM4P50479 330 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 RAB5BP61020 215 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 C5orf64Q2M2E5 130 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 PQLC2Q6ZP29 291 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 Q8N6K4 173 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 AJUBAQ96IF1 538 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
SMC6-206ENST00000446852 MRPL32Q9BYC8 188 aaKnown RBP13.86□□□□□ -0.19
SMC6-206ENST00000446852 TNFRSF19Q9NS68 423 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 TRBV20OR9-2A0A075B6H5 130 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 GOSR1O95249 250 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 OR10J4P0C629 311 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 C8orf88P0DMB2 117 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 SELENOTP62341 195 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 OR4X1Q8NH49 305 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 UHRF2Q96PU4 802 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 LPAR2Q9HBW0 351 aa13.86□□□□□ -0.19
SMC6-206ENST00000446852 COX7A2P2O60397 106 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 TAS2R45P59539 299 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 C16orf82Q7Z2V1 217 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 SRSF8Q9BRL6 282 aaKnown RBP13.85□□□□□ -0.19
SMC6-206ENST00000446852 CTDSP1Q9GZU7 261 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 SAV1Q9H4B6 383 aaPredicted RBP13.85□□□□□ -0.19
SMC6-206ENST00000446852 TMEM167BQ9NRX6 74 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 PGPEP1LA6NFU8 196 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 CTRB1P17538 263 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 UBE2E1P51965 193 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 FXYD3Q14802 87 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
SMC6-206ENST00000446852 GSX1Q9H4S2 264 aaPredicted RBP13.85□□□□□ -0.19
SMC6-206ENST00000446852 LRRK2Q5S007 2527 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 EBI3Q14213 229 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms