RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 RLN2P04090 185 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 PVALBP20472 110 aaPredicted RBP5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 GPR183P32249 361 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 RAB9AP51151 201 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 RAP2BP61225 183 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 EWSR1Q01844 656 aaKnown RBP eCLIP5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 ATP5G2Q06055 141 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 EXOSC2Q13868 293 aaKnown RBP5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 C15orf32Q32M92 178 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 AARDQ4LEZ3 155 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 Q56UQ5 140 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 PRSS54Q6PEW0 395 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 ACOT7LQ6ZUV0 252 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 KLHL30-AS1Q8NEE0 82 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 SMIM8Q96KF7 97 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 C12orf57Q99622 126 aa5.87□□□□□ -1.47
SF3A3P1-201ENST00000446317 SETD2Q9BYW2 2564 aaPredicted RBP5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 UBE2L5PA0A1B0GUS4 154 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 FAM90A26D6RGX4 464 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 E5RGE8 158 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 K7EIM0 57 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 ZNF207O43670 478 aaKnown RBP5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 EIF3GO75821 320 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 IGLV1-40P01703 118 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 IGHG4P01861 327 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 CRYGCP07315 174 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 EDN2P20800 178 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 PSMB8P28062 276 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 RPL12P30050 165 aaKnown RBP5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 HTR2BP41595 481 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 PCP4P48539 62 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 RND2P52198 227 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 SLC38A11Q08AI6 406 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 OR2F1Q13607 317 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 LBHQ53QV2 105 aaPredicted RBP5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 TOR2AQ5JU69 321 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 TEX38Q6PEX7 206 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 C12orf54Q6X4T0 127 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 ZNF546Q86UE3 836 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 TMEM252Q8N6L7 170 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 OR4X2Q8NGF9 303 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 SPATA3Q8NHX4 192 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 SCARB1Q8WTV0 552 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 WFDC12Q8WWY7 111 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 RAB40CQ96S21 281 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 WFDC1Q9HC57 220 aa5.86□□□□□ -1.47
SF3A3P1-201ENST00000446317 IGHV4OR15-8A0A075B7B6 117 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 A0A087WW49 117 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 IGHV3-49A0A0A0MS15 119 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 PIGBOS1A0A0B4J2F0 54 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 TMEM89A2RUT3 159 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 I3L2K1 104 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 CXCL2P19875 107 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 GATA2P23769 480 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 S100PP25815 95 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 CRIP2P52943 208 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 SUB1P53999 127 aaKnown RBP eCLIP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 SLURP1P55000 103 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 RAB11AP62491 216 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 CYCSP99999 105 aaKnown RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 AKR1C1Q04828 323 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 FOXE3Q13461 319 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 KIAA0141Q14154 515 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 TIGITQ495A1 244 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 PDLIM3Q53GG5 364 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 C2orf83Q53S99 150 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 SLC16A13Q7RTY0 426 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 C3orf56Q8N813 242 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 ZNF491Q8N8L2 437 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 OR1P1Q8NH06 330 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 CIB3Q96Q77 187 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 LYRM2Q9NU23 88 aaPredicted RBP5.85□□□□□ -1.47
SF3A3P1-201ENST00000446317 RNF222A6NCQ9 220 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 PMS2P5A8MQ11 134 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 OR2C1O95371 312 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 CLEC3BP05452 202 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 SMIM6P0DI80 62 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 P2RY1P47900 373 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 MEOX2P50222 304 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 ZNF90Q03938 601 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 FOXL1Q12952 345 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 GAMTQ14353 236 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 C21orf62-AS1Q17RA5 79 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 BSXQ3C1V8 233 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 TMEM14EPQ6UXP3 125 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 OR5C1Q8NGR4 320 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 TMEM158Q8WZ71 300 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 CHRDL1Q9BU40 450 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 C21orf62Q9NYP8 219 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 FBXL17Q9UF56 701 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 HSPB11Q9Y547 144 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 U3KQ87 197 aa5.84□□□□□ -1.47
SF3A3P1-201ENST00000446317 TENM1Q9UKZ4 2725 aa5.84□□□□□ -1.48
SF3A3P1-201ENST00000446317 JMJD1CQ15652 2540 aa5.84□□□□□ -1.48
SF3A3P1-201ENST00000446317 IGHV3OR16-13A0A075B7E8 117 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms