RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ATP6V0B	Q99437	205 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	CCL13	Q99616	98 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	CDX2	Q99626	313 aa	Predicted RBP	10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	CYC1	P08574	325 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	NPY1R	P25929	384 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	LGALS7	P47929	136 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	TMEM144	Q7Z5S9	345 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	C9orf106	Q8NAJ2	232 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF355P	Q9NSJ1	428 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	SPG11	Q96JI7	2443 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	HELT	A6NFD8	242 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	GFRA3	O60609	400 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	AZU1	P20160	251 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	RPL24	P83731	157 aa	Known RBP	10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	FAM216B	Q8N7L0	139 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	OR2V2	Q96R30	315 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	GP6	Q9HCN6	339 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	OTOGL	Q3ZCN5	2332 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	GAGE10	A6NGK3	116 aa		10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	WT1	P19544	449 aa	Predicted RBP	10.3	□□□□□ -0.76
DDR1-238	ENST00000446312	IGKV1D-17	A0A075B6S4	117 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	PDE6D	O43924	150 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	RELB	Q01201	579 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	SLC35E4	Q6ICL7	350 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	GTF2H5	Q6ZYL4	71 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	FER1L6-AS1	Q8NA97	138 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	OR4S2	Q8NH73	311 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	TRBV6-6	A0A0A6YYG2	114 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	IGHV1-69-2	A0A0G2JMI3	117 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	SNAI2	O43623	268 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	MORN2	Q502X0	79 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	MPV17L2	Q567V2	206 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	RNASEK	Q6P5S7	137 aa	Known RBP	10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	ITLN1	Q8WWA0	313 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	SS18L1	O75177	396 aa	Predicted RBP	10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	CXorf1	O96002	111 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	CCL8	P80075	99 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	RPEL1	Q2QD12	228 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	SHISA2	Q6UWI4	295 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	LINC00596	Q86U02	117 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	C1orf210	Q8IVY1	113 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312		Q8IYB0	196 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	C1orf159	Q96HA4	380 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	KCNIP2	Q9NS61	270 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	TIMM9	Q9Y5J7	89 aa		10.29	□□□□□ -0.76
DDR1-238	ENST00000446312	SAA2-SAA4	A0A096LPE2	208 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	NUDT3	O95989	172 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	SAA2	P0DJI9	122 aa	Predicted RBP	10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	TEPP	Q6URK8	271 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	C1orf122	Q6ZSJ8	110 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	EAF1	Q96JC9	268 aa	Predicted RBP	10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	NRN1	Q9NPD7	142 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	FAM90A26	D6RGX4	464 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	CSN3	P07498	182 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	STAG3L2	P0CL84	134 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF138	P52744	262 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	RPL8	P62917	257 aa	Known RBP	10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	GABRA6	Q16445	453 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	OR1B1	Q8NGR6	318 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	NABP2	Q9BQ15	211 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	CHRDL1	Q9BU40	450 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	CXXC4	Q9H2H0	198 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	IGKV1OR2-108	A0A075B7D4	117 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	MFAP2	P55001	183 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	CT45A1	Q5HYN5	189 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	FDCSP	Q8NFU4	85 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	CT45A3	Q8NHU0	189 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312	THYN1	Q9P016	225 aa		10.28	□□□□□ -0.76
DDR1-238	ENST00000446312		J3QR06	171 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	YPEL1	O60688	119 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	RAB31	Q13636	194 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	DIAPH2-AS1	Q14236	149 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF718	Q3SXZ3	478 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	HCP5	Q6MZN7	132 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	YPEL2	Q96QA6	119 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	TPPP3	Q9BW30	176 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	MUC21	A0A0G2JKD1	596 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	MUC21	A0A140T8X8	626 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	DPRX	A6NFQ7	191 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	SRRM4	A7MD48	611 aa	Known RBP	10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	ESD	P10768	282 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	ORM2	P19652	201 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	PPOX	P50336	477 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	PLP1	P60201	277 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	PSG9	Q00887	426 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	MUC21	Q5SSG8	566 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	H1FX	Q92522	213 aa	Known RBP	10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	BORCS7	Q96B45	105 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	NPVF	Q9HCQ7	196 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	IL36B	Q9NZH7	164 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	OR51B2	Q9Y5P1	312 aa		10.27	□□□□□ -0.77
DDR1-238	ENST00000446312	IGF2R	P11717	2491 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	ENSA	O43768	121 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	VENTX	O95231	258 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	MOS	P00540	346 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	CLEC3B	P05452	202 aa		10.26	□□□□□ -0.77

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