RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 OR5B3Q8NH48 314 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 YTHDF2Q9Y5A9 579 aaKnown RBP13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 PLGLAQ15195 96 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM30BQ3MIR4 351 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM177Q53S58 311 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 OR8B3Q8NGG8 313 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 C22orf15Q8WYQ4 148 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 RPEQ96AT9 228 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 OR8B2Q96RD0 313 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 FBXL15Q9H469 300 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 UBTD1Q9HAC8 227 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 NDUFA4L2Q9NRX3 87 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
LAPTM4B-201ENST00000445593 CGB1A6NKQ9 187 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 CLDN34H7C241 214 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 PSG5Q15238 335 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 RUSC1-AS1Q66K80 236 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 PDPNQ86YL7 162 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF114Q8NC26 417 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 PACRGQ96M98 296 aaPredicted RBP13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 RAB1BQ9H0U4 201 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 FKBP11Q9NYL4 201 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 AREGP15514 252 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 NPIPB3Q92617 1050 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 FNDC4Q9H6D8 234 aaPredicted RBP13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 A0A1W2PPQ1 181 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 A8MWP6 167 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 SEC14L6B5MCN3 397 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF90Q03938 601 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 HLA-DRB5Q30154 266 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 FBXL19-AS1Q494R0 122 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 YPEL4Q96NS1 127 aa13.55□□□□□ -0.24
LAPTM4B-201ENST00000445593 TRAV5A0A0B4J249 113 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 MOSP00540 346 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 STAG3L2P0CL84 134 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 STAG3L3P0CL85 134 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 GNLYP22749 145 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 CYP2G1PQ6ZSU1 146 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 CLEC7AQ9BXN2 247 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 FOLR2P14207 255 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 IL3RAP26951 378 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 GCHFRP30047 84 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 RHOBP62745 196 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 MORN5Q5VZ52 161 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 GSX1Q9H4S2 264 aaPredicted RBP13.54□□□□□ -0.24
LAPTM4B-201ENST00000445593 H7BYZ3 331 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 PNRC1Q12796 327 aaPredicted RBP13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 SVIPQ8NHG7 77 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 SLC35E1Q96K37 410 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 VPS25Q9BRG1 176 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 POLQO75417 2590 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 A0A087WWC5 75 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 IGHV1-3A0A0C4DH29 117 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 CXorf1O96002 111 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 LINC00869P0C866 280 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 CD69Q07108 199 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM250H0YL14 139 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 BUB1B-PAK6H3BSN5 160 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 PRB4P10163 310 aaPredicted RBP13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 ASPHD1Q5U4P2 390 aa13.53□□□□□ -0.24
LAPTM4B-201ENST00000445593 FCN1O00602 326 aa13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 RND2P52198 227 aa13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 PRRX1P54821 245 aa13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 FAM3BP58499 235 aaPredicted RBP13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.24
LAPTM4B-201ENST00000445593 HES1Q14469 280 aa13.52□□□□□ -0.25
LAPTM4B-201ENST00000445593 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
LAPTM4B-201ENST00000445593 TIMD4Q96H15 378 aa13.52□□□□□ -0.25
LAPTM4B-201ENST00000445593 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.25
LAPTM4B-201ENST00000445593 DLL1O00548 723 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 LINC00311Q8N616 119 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 LPAR2Q9HBW0 351 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 ZFHX3Q15911 3703 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 C19orf84I3L1E1 186 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR5G3P0C626 314 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 GALR1P47211 349 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRR20EP86478 221 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRR20CP86479 221 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRR20DP86480 221 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRR20BP86481 221 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRR20AP86496 221 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 RAB1CQ92928 201 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 S4R3C0 116 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 LRRK2Q5S007 2527 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■■■■■ 27.8
LAPTM4B-201ENST00000445593 TRBV20OR9-2A0A075B6H5 130 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 M0R143 59 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms