RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 OR5C1Q8NGR4 320 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
CCNE1-203ENST00000444983 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 COL6A5A8TX70 2615 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 FNDC10F2Z333 226 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 HAX1O00165 279 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 DLK1P80370 383 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 GAMTQ14353 236 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 LGALSLQ3ZCW2 172 aaPredicted RBP11.71□□□□□ -0.53
CCNE1-203ENST00000444983 AWAT1Q58HT5 328 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 CXorf58Q96LI9 332 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 UBE2E2Q96LR5 201 aa11.71□□□□□ -0.53
CCNE1-203ENST00000444983 A0A0G2JLM5 398 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 IGHV3-48P01763 117 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 CD28P10747 220 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 HBG1P69891 147 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 HBG2P69892 147 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 ATP5G2Q06055 141 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 OR2F1Q13607 317 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 ZNF502Q8TBZ5 544 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 CCDC140Q96MF4 163 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 C19orf24Q9BVV8 132 aa11.71□□□□□ -0.54
CCNE1-203ENST00000444983 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 RPS10-NUDT3A0A1W2PQS6 291 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
CCNE1-203ENST00000444983 CDX1P47902 265 aaPredicted RBP11.7□□□□□ -0.54
CCNE1-203ENST00000444983 EIF2B2P49770 351 aaKnown RBP11.7□□□□□ -0.54
CCNE1-203ENST00000444983 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
CCNE1-203ENST00000444983 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 TRBV7-1A0A0A6YYK4 115 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 AP2S1P53680 142 aaPredicted RBP11.69□□□□□ -0.54
CCNE1-203ENST00000444983 TREML4Q6UXN2 200 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 C9orf62Q8N4C0 152 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 TXN2Q99757 166 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 S4R3C0 116 aa11.69□□□□□ -0.54
CCNE1-203ENST00000444983 A0A0D9SG52 128 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 TMEM158Q8WZ71 300 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 EEF1AKMT3Q96AZ1 226 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
CCNE1-203ENST00000444983 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.68□□□□□ -0.54
CCNE1-203ENST00000444983 BOLA2-SMG1P6H3BVE0 249 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 CLN5O75503 358 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 RND2P52198 227 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 MFAP4P55083 255 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 CLINT1Q14677 625 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 CITED2Q99967 270 aaPredicted RBP11.68□□□□□ -0.54
CCNE1-203ENST00000444983 TMEM147Q9BVK8 224 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 ZC4H2Q9NQZ6 224 aa11.68□□□□□ -0.54
CCNE1-203ENST00000444983 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 I3L521 148 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 CLEC3BP05452 202 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 CTSGP08311 255 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 NKX2-5P52952 324 aaPredicted RBP11.67□□□□□ -0.54
CCNE1-203ENST00000444983 RUNX1Q01196 453 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 HIST2H2BDQ6DRA6 164 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 C11orf44Q8N8P7 122 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 SLC35E1Q96K37 410 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 ATP5SQ99766 215 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 SMIM3Q9BZL3 60 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 CYTL1Q9NRR1 136 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 STAB1Q9NY15 2570 aa11.67□□□□□ -0.54
CCNE1-203ENST00000444983 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 TAAR5O14804 337 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
CCNE1-203ENST00000444983 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 ADMP35318 185 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 NPBWR1P48145 328 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 ACSM6Q6P461 480 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 TMUB2Q71RG4 321 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 ACY3Q96HD9 319 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 CITED1Q99966 193 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 WDR83OSQ9Y284 106 aa11.66□□□□□ -0.54
CCNE1-203ENST00000444983 TSSC4Q9Y5U2 329 aaPredicted RBP11.66□□□□□ -0.54
CCNE1-203ENST00000444983 DFFBO76075 338 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms