RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MFAP4P55083 255 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM187Q14656 261 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 Q56UQ5 140 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 TMED4Q7Z7H5 227 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 LGI3Q8N145 548 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 OR52B4Q8NGK2 314 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 PINX1Q96BK5 328 aaKnown RBP8.1□□□□□ -1.11
SF3A1-203ENST00000444440 TXN2Q99757 166 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 C20orf24Q9BUV8 137 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
SF3A1-203ENST00000444440 IGHV3-49A0A0A0MS15 119 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 A0A0B4J2A0 478 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 CORTO00230 105 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 SULT1A3P0DMM9 295 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 SULT1A4P0DMN0 295 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 RNASE2P10153 161 aaKnown RBP8.09□□□□□ -1.11
SF3A1-203ENST00000444440 HOXA1P49639 335 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-203ENST00000444440 RBMS2Q15434 407 aaKnown RBP8.09□□□□□ -1.11
SF3A1-203ENST00000444440 BAK1Q16611 211 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 CNPY1Q3B7I2 92 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 ODF3L2Q3SX64 289 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 PVRIGQ6DKI7 326 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM230Q96A57 120 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 GPR146Q96CH1 333 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 C7orf50Q9BRJ6 194 aaKnown RBP8.09□□□□□ -1.11
SF3A1-203ENST00000444440 FNDC4Q9H6D8 234 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-203ENST00000444440 PRR13Q9NZ81 148 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 SHPKQ9UHJ6 478 aa8.09□□□□□ -1.11
SF3A1-203ENST00000444440 TRAV25A0A0B4J276 109 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 DUXBA0A1W2PPF3 345 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 TSPAN4O14817 238 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 NUPL2O15504 423 aaKnown RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 VAMP1P23763 118 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 FCGR2BP31994 310 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 HTR2BP41595 481 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 CCR6P51684 374 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 UBE2MP61081 183 aaKnown RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 SUPT4H1P63272 117 aaKnown RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 ZNF124Q15973 351 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 MLANAQ16655 118 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 AARDQ4LEZ3 155 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 RBPMS2Q6ZRY4 209 aaKnown RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 LINC00299Q6ZSB3 139 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 SLC16A13Q7RTY0 426 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 CENPSQ8N2Z9 138 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 DUSP18Q8NEJ0 188 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 RNF2Q99496 336 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-203ENST00000444440 CACNG5Q9UF02 275 aa8.08□□□□□ -1.12
SF3A1-203ENST00000444440 IGHV3OR16-13A0A075B7E8 117 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 IGHV3-74A0A0B4J1X5 117 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 A0A1B0GU03 582 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 C15orf62A8K5M9 175 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 CEBPZOSA8MTT3 80 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 K7EMT4 169 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 CHEK1O14757 476 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 APOHP02749 345 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-203ENST00000444440 NPBWR1P48145 328 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 RELQ04864 619 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-203ENST00000444440 SMCO1Q147U7 214 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 BSXQ3C1V8 233 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 LILRB2Q8N423 598 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 TMEM170AQ8WVE7 144 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 S100ZQ8WXG8 99 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 OR10C1Q96KK4 312 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-203ENST00000444440 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 SMPXQ9UHP9 88 aa8.07□□□□□ -1.12
SF3A1-203ENST00000444440 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 IGHV7-4-1A0A0J9YVY3 117 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 LINC00854A0A1B0GVQ3 168 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 A6NHS1 94 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 GNG7O60262 68 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 NDUFB6O95139 128 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 NXPH3O95157 252 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 SFT2D2O95562 160 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 IL7P13232 177 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 LYZL2Q7Z4W2 148 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 LRTM2Q8N967 370 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 OR1S1Q8NH92 325 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 SDHCQ99643 169 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-203ENST00000444440 RHPN1-AS1Q9BWJ2 59 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
SF3A1-203ENST00000444440 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-203ENST00000444440 IGHV3-66A0A0C4DH42 116 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 RPS10-NUDT3A0A1W2PQS6 291 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 YIF1AO95070 293 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 TMEM50AO95807 157 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 SLC25A6P12236 298 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 ATP5IP56385 69 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-203ENST00000444440 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
SF3A1-203ENST00000444440 NMSQ5H8A3 153 aa8.05□□□□□ -1.12
SF3A1-203ENST00000444440 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms