RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 HEYLQ9NQ87 328 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-205ENST00000444415 DUXBA0A1W2PPF3 345 aa16.39■□□□□ 0.21
TRAF4-205ENST00000444415 CEBPZOSA8MTT3 80 aa16.39■□□□□ 0.21
TRAF4-205ENST00000444415 NUPL2O15504 423 aaKnown RBP16.39■□□□□ 0.21
TRAF4-205ENST00000444415 HTR2BP41595 481 aa16.39■□□□□ 0.21
TRAF4-205ENST00000444415 SLC24A4Q8NFF2 622 aa16.39■□□□□ 0.21
TRAF4-205ENST00000444415 MARC2Q969Z3 335 aa16.39■□□□□ 0.21
TRAF4-205ENST00000444415 GAR1Q9NY12 217 aaKnown RBP16.39■□□□□ 0.21
TRAF4-205ENST00000444415 A0A1B0GU03 582 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 CORTO00230 105 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 GNG7O60262 68 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 TMEM50AO95807 157 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 SUB1P53999 127 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAF4-205ENST00000444415 C7orf50Q9BRJ6 194 aaKnown RBP16.38■□□□□ 0.21
TRAF4-205ENST00000444415 C20orf24Q9BUV8 137 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 RBKSQ9H477 322 aa16.38■□□□□ 0.21
TRAF4-205ENST00000444415 KMT2CQ8NEZ4 4911 aaKnown RBP16.38■□□□□ 0.21
TRAF4-205ENST00000444415 C9orf170A2RU37 121 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 C15orf62A8K5M9 175 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 K7EMT4 169 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 NHLRC4P0CG21 123 aaPredicted RBP16.37■□□□□ 0.21
TRAF4-205ENST00000444415 OPRK1P41145 380 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 CD81P60033 236 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 UBE2MP61081 183 aaKnown RBP16.37■□□□□ 0.21
TRAF4-205ENST00000444415 GTSCR1Q86UQ5 136 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 DUSP18Q8NEJ0 188 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 ZFAND3Q9H8U3 227 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 NBEAL2Q6ZNJ1 2754 aa16.37■□□□□ 0.21
TRAF4-205ENST00000444415 SCAF4O95104 1147 aaKnown RBP16.36■□□□□ 0.21
TRAF4-205ENST00000444415 ANXA7P20073 488 aaKnown RBP16.36■□□□□ 0.21
TRAF4-205ENST00000444415 NPBWR1P48145 328 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 RELQ04864 619 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-205ENST00000444415 GUCA2BQ16661 112 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 LINC00299Q6ZSB3 139 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 OR4X1Q8NH49 305 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 DTD1Q8TEA8 209 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 NEURL2Q9BR09 285 aa16.36■□□□□ 0.21
TRAF4-205ENST00000444415 MPTX1A8MV57 137 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 CLN5O75503 358 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 OR4E1P0C645 316 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 NPY1RP25929 384 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 DHRS2Q13268 280 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 TOMM20LQ6UXN7 152 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 IGKV1-17P01599 117 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 HOXB5P09067 269 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 SLC25A6P12236 298 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 GGNBP1Q5YKI7 109 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 OR1S1Q8NH92 325 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 TMED3Q9Y3Q3 217 aa16.35■□□□□ 0.21
TRAF4-205ENST00000444415 CENPXA8MT69 81 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 LYRM1O43325 122 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 ADAP1O75689 374 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 LINC00322Q6ZN03 302 aaPredicted RBP16.34■□□□□ 0.21
TRAF4-205ENST00000444415 DEFB125Q8N687 156 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 RNASEH2CQ8TDP1 164 aaKnown RBP16.34■□□□□ 0.21
TRAF4-205ENST00000444415 CCDC32Q9BV29 185 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 CACFD1Q9UGQ2 172 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 SMPXQ9UHP9 88 aa16.34■□□□□ 0.21
TRAF4-205ENST00000444415 PUS1Q9Y606 427 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRAF4-205ENST00000444415 IGHV3-49A0A0A0MS15 119 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 IGHV7-4-1A0A0J9YVY3 117 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 YIF1AO95070 293 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 LYG2Q86SG7 212 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 RNF2Q99496 336 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 HIPK2Q9H2X6 1198 aa16.33■□□□□ 0.2
TRAF4-205ENST00000444415 CSMD3Q7Z407 3707 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 TRAV25A0A0B4J276 109 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 CHEK1O14757 476 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 APOHP02749 345 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-205ENST00000444415 IGLC1P0CG04 106 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 ZNF600Q6ZNG1 722 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 TM2D3Q9BRN9 247 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 C20orf85Q9H1P6 137 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 TBC1D24Q9ULP9 559 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 U3KQ87 197 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 U3KQK5 164 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 STARD9Q9P2P6 4700 aa16.32■□□□□ 0.2
TRAF4-205ENST00000444415 IGHV3OR16-13A0A075B7E8 117 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 IGHV3-74A0A0B4J1X5 117 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 TSPAN4O14817 238 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 RND2P52198 227 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 TIGITQ495A1 244 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 LILRB2Q8N423 598 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 TMEM116Q8NCL8 245 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 OR52B4Q8NGK2 314 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 RHPN1-AS1Q9BWJ2 59 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 PTTG2Q9NZH5 202 aa16.31■□□□□ 0.2
TRAF4-205ENST00000444415 PIGBOS1A0A0B4J2F0 54 aa16.3■□□□□ 0.2
TRAF4-205ENST00000444415 RBMY1BA6NDE4 496 aaKnown RBP16.3■□□□□ 0.2
TRAF4-205ENST00000444415 RBMY1EA6NEQ0 496 aaKnown RBP16.3■□□□□ 0.2
TRAF4-205ENST00000444415 IFNA10P01566 189 aa16.3■□□□□ 0.2
TRAF4-205ENST00000444415 RBMY1DP0C7P1 496 aaKnown RBP16.3■□□□□ 0.2
TRAF4-205ENST00000444415 IAPPP10997 89 aa16.3■□□□□ 0.2
TRAF4-205ENST00000444415 TRAV14DV4A0A0A6YYC5 116 aa16.29■□□□□ 0.2
TRAF4-205ENST00000444415 RPS10-NUDT3A0A1W2PQS6 291 aa16.29■□□□□ 0.2
TRAF4-205ENST00000444415 OR11H12B2RN74 326 aa16.29■□□□□ 0.2
TRAF4-205ENST00000444415 FAM90A26D6RGX4 464 aa16.29■□□□□ 0.2
TRAF4-205ENST00000444415 HAGHQ16775 308 aa16.29■□□□□ 0.2
TRAF4-205ENST00000444415 FAM90A2PQ658T7 463 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms