RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 GPR61Q9BZJ8 451 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 C11orf1Q9H5F2 150 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 HEYLQ9NQ87 328 aaPredicted RBP9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 MLXQ9UH92 298 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 RCL1Q9Y2P8 373 aaKnown RBP9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 FAM90A26D6RGX4 464 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 IGKV1-17P01599 117 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 C8orf88P0DMB2 117 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 FOLR2P14207 255 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 MFAP4P55083 255 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 POLR2GP62487 172 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 IL15RAQ13261 267 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 Q56UQ5 140 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 MZT2BQ6NZ67 158 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 MARVELD1Q9BSK0 173 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 ENY2Q9NPA8 101 aa9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
PDLIM2-212ENST00000443561 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 CYB5BO43169 146 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 SYNGR2O43760 224 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 CCNKO75909 580 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 TGP01266 2768 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 SPSB3Q6PJ21 355 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 OR4X1Q8NH49 305 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 ENKURQ8TC29 256 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 TXN2Q99757 166 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 COL7A1Q02388 2944 aa9.69□□□□□ -0.86
PDLIM2-212ENST00000443561 IGKV1D-37A0A075B6S9 117 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 ZNF785A8K8V0 405 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 H3BP45 60 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 CORTO00230 105 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 WRBO00258 174 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 NDUFA4O00483 81 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 ZNF207O43670 478 aaKnown RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 CLN5O75503 358 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 MBPP02686 304 aaPredicted RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 CBLN1P23435 193 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 OPRK1P41145 380 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 CD69Q07108 199 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 IAH1Q2TAA2 248 aaPredicted RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 DEFB114Q30KQ6 69 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 Q8N1Y9 231 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 TMEM116Q8NCL8 245 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 MRAPQ8TCY5 172 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 ELOVL1Q9BW60 279 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 U3KQ87 197 aa9.68□□□□□ -0.86
PDLIM2-212ENST00000443561 IGKV1OR2-108A0A075B7D4 117 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 SCAF4O95104 1147 aaKnown RBP9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 IFNA10P01566 189 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 GP9P14770 177 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 RND2P52198 227 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 SUB1P53999 127 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 TIGITQ495A1 244 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 TOMM20LQ6UXN7 152 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 SLC16A13Q7RTY0 426 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 UXS1Q8NBZ7 420 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 HIPK2Q9H2X6 1198 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 PEMTQ9UBM1 199 aa9.67□□□□□ -0.86
PDLIM2-212ENST00000443561 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 ZNF320A2RRD8 509 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 INMT-MINDY4F8WBC2 141 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 SSSCA1O60232 199 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 GNG7O60262 68 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 APOHP02749 345 aaPredicted RBP9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 NKX2-1P43699 371 aaPredicted RBP9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
PDLIM2-212ENST00000443561 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 C7orf66A4D0T2 115 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 SIX6O95475 246 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 NPBWR1P48145 328 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 ARL16Q0P5N6 197 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 GAMTQ14353 236 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 TATDN3Q17R31 274 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 TMEM14EPQ6UXP3 125 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 WFDC10AQ9H1F0 79 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 PUS1Q9Y606 427 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDLIM2-212ENST00000443561 HUWE1Q7Z6Z7 4374 aaKnown RBP9.65□□□□□ -0.87
PDLIM2-212ENST00000443561 SNRPGP15A8MWD9 76 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 K7EMT4 169 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 K7EPK0 472 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 MED6O75586 246 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 SCGB1D2O95969 90 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 IFNA21P01568 189 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 SLC25A4P12235 298 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms