RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 Q6ZS49 121 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 DMRTA2Q96SC8 542 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 A1L4Q6 167 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 RPLP1P05386 114 aaKnown RBP18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 DLX6P56179 175 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 RPS20P60866 119 aaKnown RBP18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 SAPCD1Q5SSQ6 148 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 ZFP30Q9Y2G7 519 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 TMEM14EPQ6UXP3 125 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 RNASE7Q9H1E1 156 aaKnown RBP18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 CBLN4Q9NTU7 201 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 PHLDA3Q9Y5J5 127 aa18.53■□□□□ 0.56
CTDSPL-206ENST00000443503 IGKV1D-17A0A075B6S4 117 aa18.52■□□□□ 0.56
CTDSPL-206ENST00000443503 IGKV1-6A0A0C4DH72 117 aa18.52■□□□□ 0.56
CTDSPL-206ENST00000443503 GGTLC1Q9BX51 225 aa18.52■□□□□ 0.56
CTDSPL-206ENST00000443503 TIMM23O14925 209 aa18.52■□□□□ 0.55
CTDSPL-206ENST00000443503 FAM90A9PA6NNJ1 464 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 A0A0G2JNJ9 132 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 SIAH2O43255 324 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 Q9UFV3 132 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 TAS2R60P59551 318 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 HERVK_113P61574 105 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 ZNF672Q499Z4 452 aaPredicted RBP18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 DMRT1Q9Y5R6 373 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 HOXA5P20719 270 aa18.51■□□□□ 0.55
CTDSPL-206ENST00000443503 WDR87Q6ZQQ6 2873 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 MUC21A0A0G2JKD1 596 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 MUC21A0A140T8X8 626 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 GPX1P07203 203 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 MUC21Q5SSG8 566 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 FAM168AQ92567 244 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 Q9H3A6 140 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 FOLR2P14207 255 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 GNG5P63218 68 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 SRSF9Q13242 221 aaKnown RBP eCLIP18.5■□□□□ 0.557e-6■■■■□ 19.5
CTDSPL-206ENST00000443503 OCC1Q8TAD7 63 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 GPR82Q96P67 336 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 HLA-DRB1P01911 266 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 COL5A1-AS1Q5SY13 56 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 TMEM200BQ69YZ2 307 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 MAP1LC3AQ9H492 121 aa18.5■□□□□ 0.55
CTDSPL-206ENST00000443503 HINT1P49773 126 aaPredicted RBP18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 TCF24Q7RTU0 167 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 TMEM178BH3BS89 294 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 TCF23Q7RTU1 214 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 C7orf69Q9H7B7 122 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 TCRBV4S1A1TA0A5B7 111 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 OR4C46A6NHA9 309 aa18.49■□□□□ 0.55
CTDSPL-206ENST00000443503 SOD3P08294 240 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H1AQ02539 215 aaPredicted RBP18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 OR10AG1Q8NH19 301 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 AP5S1Q9NUS5 200 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 UQCR10Q9UDW1 63 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 THBDP07204 575 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 MYOD1P15172 320 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 CLEC19AQ6UXS0 136 aa18.48■□□□□ 0.55
CTDSPL-206ENST00000443503 TRAV1-1A0A0B4J248 108 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 A0A1W2PRE2 83 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 ZNF502Q8TBZ5 544 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 ZNF503-AS2A6NEH8 195 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 COLCA2A8K830 154 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 IGKV3-20P01619 116 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BKO60814 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BJP06899 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 LYL1P12980 280 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BOP23527 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BBP33778 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BDP58876 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BCP62807 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST2H2BEQ16778 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BHQ93079 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BNQ99877 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 HIST1H2BMQ99879 126 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 LIME1Q9H400 295 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 ZNF257Q9Y2Q1 563 aa18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 ANKHD1Q8IWZ3 2542 aaKnown RBP18.47■□□□□ 0.55
CTDSPL-206ENST00000443503 A0A1B0GUT8 65 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 DPRXA6NFQ7 191 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 STAG3L2P0CL84 134 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 STAG3L3P0CL85 134 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 RPRMLQ8N4K4 120 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 MED13Q9UHV7 2174 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 FREM1Q5H8C1 2179 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 A6NDN8 102 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 HIGD1CA8MV81 97 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 ZNF585BQ52M93 769 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 LBHQ53QV2 105 aaPredicted RBP18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 TMEM136Q6ZRR5 245 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 KLK15Q9H2R5 256 aa18.46■□□□□ 0.55
CTDSPL-206ENST00000443503 IGHV1-8P0DP01 117 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 SPATA31B1PQ5VZV4 182 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 GLRX5Q86SX6 157 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 RPP21Q9H633 154 aaKnown RBP18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 MBNL3Q9NUK0 354 aaKnown RBP18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 TRAV5A0A0B4J249 113 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 RNF125Q96EQ8 232 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 KCNS1Q96KK3 526 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 PLXNB3Q9ULL4 1909 aa18.45■□□□□ 0.54
CTDSPL-206ENST00000443503 IGHV3-11P01762 117 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms