RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TMEM167BQ9NRX6 74 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 BEX4Q9NWD9 120 aaPredicted RBP7.37□□□□□ -1.23
HDAC6-209ENST00000440653 DOK5Q9P104 306 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 SLC45A2Q9UMX9 530 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.36□□□□□ -1.239e-8■■■□□ 18
HDAC6-209ENST00000440653 MGAM2Q2M2H8 2515 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 OOSP1A8MZH6 123 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 BUB1B-PAK6H3BSN5 160 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 ACTL6BO94805 426 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 ARL14EPLP0DKL9 152 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 MIC13Q5XKP0 118 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 C11orf42Q8N5U0 333 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 OR4P4Q8NGL7 312 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 SSBP3Q9BWW4 388 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-209ENST00000440653 PARLQ9H300 379 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 ZNF430Q9H8G1 570 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-209ENST00000440653 PATZ1Q9HBE1 687 aaKnown RBP7.36□□□□□ -1.23
HDAC6-209ENST00000440653 ZNRD1Q9P1U0 126 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
HDAC6-209ENST00000440653 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 PPP1R2P9O14990 202 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 ENSAO43768 121 aaKnown RBP7.35□□□□□ -1.23
HDAC6-209ENST00000440653 SLC25A17O43808 307 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 PAGE4O60829 102 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 S100A6P06703 90 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 OR5G3P0C626 314 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 COL8A2P25067 703 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 S100PP25815 95 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 GCHFRP30047 84 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 AKR1C3P42330 323 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 GPR6P46095 362 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-209ENST00000440653 RPL27AP46776 148 aaKnown RBP7.35□□□□□ -1.23
HDAC6-209ENST00000440653 REG1BP48304 166 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 PVRIGQ6DKI7 326 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 CCDC144NLQ6NUI1 221 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 C1orf122Q6ZSJ8 110 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 THAP8Q8NA92 274 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 OR11H6Q8NGC7 330 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 OR1L4Q8NGR5 311 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 C11orf52Q96A22 123 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 UHRF2Q96PU4 802 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 TCEAL7Q9BRU2 100 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 TECRQ9NZ01 308 aaKnown RBP7.35□□□□□ -1.23
HDAC6-209ENST00000440653 ONECUT1Q9UBC0 465 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 TRRAPQ9Y4A5 3859 aa7.35□□□□□ -1.23
HDAC6-209ENST00000440653 TRBV24-1A0A075B6N3 115 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 ODF3BA8MYP8 253 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 AREGP15514 252 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-209ENST00000440653 ADIRFQ15847 76 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 PRSS8Q16651 343 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 TPTE2P1Q5T6R2 138 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 FAM24BQ8N5W8 94 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 OR1L6Q8NGR2 347 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 SSMEM1Q8WWF3 244 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 ISOC2Q96AB3 205 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
HDAC6-209ENST00000440653 OR5B12Q96R08 314 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 INSIG2Q9Y5U4 225 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 LY96Q9Y6Y9 160 aa7.34□□□□□ -1.23
HDAC6-209ENST00000440653 LOC105371242A0A075B767 164 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 A0A1W2PPI3 338 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 A0A1W2PPR1 153 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 TCRBV4S1A1TA0A5B7 111 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 C22orf46C9J442 243 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 C9JCJ5 164 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 LY6LH3BQJ8 138 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 H7BYZ3 331 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
HDAC6-209ENST00000440653 S100A8P05109 93 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 CRYGBP07316 175 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 SOD3P08294 240 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 PRTN3P24158 256 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 COX7A1P24310 79 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 HTR1DP28221 377 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 RPL23P62829 140 aaKnown RBP7.33□□□□□ -1.24
HDAC6-209ENST00000440653 WT1-ASQ06250 92 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 GAMTQ14353 236 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 ELOBQ15370 118 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 GCSAMLQ5JQS6 135 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 MINOS1Q5TGZ0 78 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 MOB3BQ86TA1 216 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 MAPK1IP1LQ8NDC0 245 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 OR1P1Q8NH06 330 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 C1orf159Q96HA4 380 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 TMPRSS5Q9H3S3 457 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 SIGLEC9Q9Y336 463 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 MINOS1-NBL1R4GNA1 71 aa7.33□□□□□ -1.24
HDAC6-209ENST00000440653 ROS1P08922 2347 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 IGLC7A0M8Q6 106 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 LYNX1G3V0Z9 82 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 FABP1P07148 127 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 LINC00869P0C866 280 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 LYNX1P0DP58 116 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 MYOD1P15172 320 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 OR10J1P30954 320 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms