RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MRPL18Q9H0U6 180 aaKnown RBP11.52□□□□□ -0.57
LIMD1-202ENST00000440097 ENY2Q9NPA8 101 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 RNF114Q9Y508 228 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
LIMD1-202ENST00000440097 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
LIMD1-202ENST00000440097 BAGE3Q86Y29 109 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 BAGE2Q86Y30 109 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 SAMD10Q9BYL1 202 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 KCNIP2Q9NS61 270 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 ESDP10768 282 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
LIMD1-202ENST00000440097 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
LIMD1-202ENST00000440097 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 APOA2P02652 100 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 ZNF90Q03938 601 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 PRB3Q04118 309 aaPredicted RBP11.5□□□□□ -0.57
LIMD1-202ENST00000440097 MMDQ15546 238 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 ANKRD39Q53RE8 183 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 POLQO75417 2590 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 C15orf61A6NNL5 157 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 MYOD1P15172 320 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 OR10G8Q8NGN5 311 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
LIMD1-202ENST00000440097 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 FBXL7Q9UJT9 491 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 DLX1P56177 255 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 SLC35E1Q96K37 410 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
LIMD1-202ENST00000440097 TNCP24821 2201 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 SLC17A3O00476 420 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
LIMD1-202ENST00000440097 UQCRFS1P47985 274 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 KRTDAPP60985 99 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 HRNRQ86YZ3 2850 aaPredicted RBP11.49□□□□□ -0.57
LIMD1-202ENST00000440097 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 RRHO14718 337 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 Q8N7P7 452 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 OR1L6Q8NGR2 347 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 OR51B2Q9Y5P1 312 aa11.49□□□□□ -0.57
LIMD1-202ENST00000440097 J3QR06 171 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 CD1BP29016 333 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 OR52E5Q8NH55 327 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 FCN1O00602 326 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 IGHV1-8P0DP01 117 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 IER3P46695 156 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
LIMD1-202ENST00000440097 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 STPG4Q8N801 248 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 Q8N976 141 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
LIMD1-202ENST00000440097 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
LIMD1-202ENST00000440097 SRRM4A7MD48 611 aaKnown RBP11.47□□□□□ -0.57
LIMD1-202ENST00000440097 DIRC3C9JPN6 131 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 NDUFB8O95169 186 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 SPATA45Q537H7 98 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
LIMD1-202ENST00000440097 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 GNLYP22749 145 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 PPOXP50336 477 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 OR9G1Q8NH87 305 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 FLYWCH2Q96CP2 140 aaKnown RBP11.47□□□□□ -0.57
LIMD1-202ENST00000440097 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
LIMD1-202ENST00000440097 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
LIMD1-202ENST00000440097 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
LIMD1-202ENST00000440097 CTRLP40313 264 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
LIMD1-202ENST00000440097 BPIFB3P59826 476 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 SLC24A4Q8NFF2 622 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 TIMD4Q96H15 378 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
LIMD1-202ENST00000440097 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 SNURFLB1AK76 121 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 K7EN84 100 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 NPY1RP25929 384 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 SUMO1P63165 101 aaKnown RBP11.46□□□□□ -0.58
LIMD1-202ENST00000440097 Q0VG73 95 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 AARDQ4LEZ3 155 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 OR8B3Q8NGG8 313 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.58
LIMD1-202ENST00000440097 TMEM186Q96B77 213 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 OR8B2Q96RD0 313 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 RNF2Q99496 336 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms