RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 COL8A1P27658 744 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 MUC21Q5SSG8 566 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 HCP5Q6MZN7 132 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 SPACA3Q8IXA5 215 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 TDHQ8IZJ6 230 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 Q8N7P7 452 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 RAB37Q96AX2 223 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 HCFC1P51610 2035 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 WNK2Q9Y3S1 2297 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 A0A087X0K7 114 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 ZNF891A8MT65 544 aaPredicted RBP7.43□□□□□ -1.22
COPB1-202ENST00000439561 PROP1O75360 226 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 PPOXP50336 477 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 VWA1Q6PCB0 445 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 INO80CQ6PI98 192 aaPredicted RBP7.43□□□□□ -1.22
COPB1-202ENST00000439561 KIR3DL3Q8N743 410 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 TMEM178AQ8NBL3 297 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 OR8A1Q8NGG7 326 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 FER1L6-AS2Q96M78 137 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 GP6Q9HCN6 339 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 TNFRSF19Q9NS68 423 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 A0A1W2PRD5 423 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 A0A1W2PRF3 423 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 A0A1W2PRM7 423 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IGKV1-16P04430 117 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 NHLH1Q02575 133 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 UTF1Q5T230 341 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
COPB1-202ENST00000439561 ARL6IP6Q8N6S5 226 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 OR10X1Q8NGY0 326 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 ITLN1Q8WWA0 313 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 RAB9BQ9NP90 201 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IDI2-AS1Q9NZ38 188 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 SPRR3Q9UBC9 169 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IGHV1-69-2A0A0G2JMI3 117 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 PPIAL4DF5H284 164 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 RIPPLY3P57055 190 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 C11orf52Q96A22 123 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 TMSB15BA0A087X1C1 80 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IGHV3-72A0A0B4J1Y9 119 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 IGHV2OR16-5A0A0B4J2B6 119 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 ESDP10768 282 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 CT45A1Q5HYN5 189 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 MORN5Q5VZ52 161 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 DHRS13Q6UX07 377 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 CT45A3Q8NHU0 189 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 GRAMD2BQ96HH9 432 aa7.42□□□□□ -1.22
COPB1-202ENST00000439561 PLXNB1O43157 2135 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 hADV38S2A0JD32 116 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 SS18L1O75177 396 aaPredicted RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 HBBP68871 147 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 LINC00173Q6ZV60 143 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 SLC25A10Q9UBX3 287 aaPredicted RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 MRPS16Q9Y3D3 137 aaKnown RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 LY96Q9Y6Y9 160 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 IGKV1D-17A0A075B6S4 117 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 A0A1W2PRE2 83 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 A8MWL6 223 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 K7ERU9 68 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 CTRLP40313 264 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 DUX4L9Q6RFH8 374 aaPredicted RBP7.41□□□□□ -1.22
COPB1-202ENST00000439561 C12orf54Q6X4T0 127 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 PRNTQ86SH4 94 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 TMEM116Q8NCL8 245 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 ASCL2Q99929 193 aa7.41□□□□□ -1.22
COPB1-202ENST00000439561 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 C15orf65H3BRN8 121 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 SAA1P0DJI8 122 aaPredicted RBP7.4□□□□□ -1.22
COPB1-202ENST00000439561 SUB1P53999 127 aaKnown RBP eCLIP7.4□□□□□ -1.226e-12■■■■■ 37.5
COPB1-202ENST00000439561 FAM162BQ5T6X4 162 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 C11orf53Q8IXP5 236 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 FAM216BQ8N7L0 139 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 Q8N976 141 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 NCKAP5O14513 1909 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 LYZP61626 148 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 PRR20EP86478 221 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 PRR20CP86479 221 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 PRR20DP86480 221 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 PRR20BP86481 221 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 PRR20AP86496 221 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 TMEM249Q2WGJ8 235 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 RNFT1Q5M7Z0 435 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 MUC15Q8N387 334 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms