RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 C5orf30Q96GV9 206 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 SPINT2O43291 252 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 CCL11P51671 97 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 Q6ZSR3 168 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 FER1L6-AS2Q96M78 137 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 CHEK1O14757 476 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 CLDN14O95500 239 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 NPFFR1Q9GZQ6 430 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 SYS1-DBNDD2H3BUS1 97 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 REG1AP05451 166 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 ARL3P36405 182 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 GPR12P47775 334 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 PRSS57Q6UWY2 283 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 LINC00470Q9BZP3 86 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 SAA2-SAA4A0A096LPE2 208 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 NMUP48645 174 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 FAM53AQ6NSI3 398 aaPredicted RBP13.09□□□□□ -0.31
DHFR-201ENST00000439211 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
DHFR-201ENST00000439211 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.31
DHFR-201ENST00000439211 J3QR06 171 aa13.08□□□□□ -0.31
DHFR-201ENST00000439211 FCER1GP30273 86 aa13.08□□□□□ -0.31
DHFR-201ENST00000439211 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.31
DHFR-201ENST00000439211 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 SP1P08047 785 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 GCHFRP30047 84 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 LINC00205P59089 165 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 KIR3DL3Q8N743 410 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 ADTRPQ96IZ2 230 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.32
DHFR-201ENST00000439211 PSG7Q13046 419 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 PSG3Q16557 428 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 OR8A1Q8NGG7 326 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 DOPEY2Q9Y3R5 2298 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 A1L4Q6 167 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 K7EN84 100 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 SMIM17P0DL12 118 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 SAMD5Q5TGI4 173 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 PKIBQ9C010 78 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 PKDREJQ9NTG1 2253 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 IGFBP2P18065 325 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 ABCA1O95477 2261 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
DHFR-201ENST00000439211 CGAP01215 116 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 IGKV1-39P01597 117 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 IGKV1D-39P04432 117 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 ZNF766Q5HY98 468 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 FAM222BQ8WU58 562 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 C17orf98A8MV24 154 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 C12orf77C9JDV5 145 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 H3BRM9 83 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 DEFB108BQ8NET1 73 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 V9GYV3 84 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 IGKV3D-15A0A087WSY6 115 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 TMEM14EPQ6UXP3 125 aa13.06□□□□□ -0.32
DHFR-201ENST00000439211 YTHDF2Q9Y5A9 579 aaKnown RBP13.06□□□□□ -0.32
DHFR-201ENST00000439211 KBTBD11-OT1A0A1B0GTJ5 212 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 SMIM13P0DJ93 91 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 DCTN5Q9BTE1 182 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 ETDBQ3ZM63 59 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 TAS2R45P59539 299 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 HES3Q5TGS1 186 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 Q6ZS49 121 aa13.05□□□□□ -0.32
DHFR-201ENST00000439211 PSPNO60542 156 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 TBR1Q16650 682 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 ZNF645Q8N7E2 425 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 DAZAP1Q96EP5 407 aaKnown RBP13.04□□□□□ -0.32
DHFR-201ENST00000439211 OOEPA6NGQ2 149 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 LRRC30A6NM36 301 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 LINC00173Q6ZV60 143 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 ANAPC13Q9BS18 74 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 EXPH5Q8NEV8 1989 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 LIPFP07098 398 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 VWC2Q2TAL6 325 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 SPATA12Q7Z6I5 190 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 LRRC29Q8WV35 223 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 TAAR6Q96RI8 345 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 MS4A6AQ9H2W1 248 aa13.04□□□□□ -0.32
DHFR-201ENST00000439211 DYSFO75923 2080 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 PSMB11A5LHX3 300 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 RPL30P62888 115 aaKnown RBP13.03□□□□□ -0.32
DHFR-201ENST00000439211 A0A1B0GW15 77 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 F2RL2O00254 374 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms