RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 WISP2O76076 250 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 SP1P08047 785 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 MORN2Q502X0 79 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 WDR82Q6UXN9 313 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 LRRC29Q8WV35 223 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 ZPBPQ9BS86 351 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 BOKQ9UMX3 212 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-204ENST00000438964 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 TIMM8AO60220 97 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-204ENST00000438964 MMP23AO75900 390 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 PRR20EP86478 221 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 PRR20CP86479 221 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 PRR20DP86480 221 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 PRR20BP86481 221 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 PRR20AP86496 221 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 TBR1Q16650 682 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 IGHV3-21A0A0B4J1V1 117 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 IGKV1-16P04430 117 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 TMEM249Q2WGJ8 235 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 AMMECR1Q9Y4X0 333 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-204ENST00000438964 RELNP78509 3460 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 LINC00322Q6ZN03 302 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-204ENST00000438964 DEFB108BQ8NET1 73 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
ACTN1-204ENST00000438964 IGHV1-24A0A0C4DH33 117 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 IL11RAQ14626 422 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
ACTN1-204ENST00000438964 DSCAMO60469 2012 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 LRRC10Q5BKY1 277 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 DUSP23Q9BVJ7 150 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 SAP30LQ9HAJ7 183 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 OR51B2Q9Y5P1 312 aa10.92□□□□□ -0.66
ACTN1-204ENST00000438964 J3QR06 171 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 NRN1LQ496H8 165 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 SLC25A34Q6PIV7 304 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 SMIM15Q7Z3B0 74 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 CNEP1R1Q8N9A8 125 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 CT55Q8WUE5 264 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 CHRDL1Q9BU40 450 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 IFI27L2Q9H2X8 130 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 SAA2P0DJI9 122 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-204ENST00000438964 FAM120AOSQ5T036 256 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 S100A7AQ86SG5 101 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 CSTL1Q9H114 145 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
ACTN1-204ENST00000438964 SYS1-DBNDD2H3BUS1 97 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 PRDX2P32119 198 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 REG1BP48304 166 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 MBD6Q96DN6 1003 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
ACTN1-204ENST00000438964 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
ACTN1-204ENST00000438964 REG1AP05451 166 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 C10orf55Q5SWW7 151 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 TPPP3Q9BW30 176 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 IDI2-AS1Q9NZ38 188 aa10.9□□□□□ -0.66
ACTN1-204ENST00000438964 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.67
ACTN1-204ENST00000438964 A0A1W2PRE2 83 aa10.9□□□□□ -0.67
ACTN1-204ENST00000438964 HSPE1P61604 102 aaKnown RBP10.9□□□□□ -0.67
ACTN1-204ENST00000438964 ABHD17BQ5VST6 288 aa10.9□□□□□ -0.67
ACTN1-204ENST00000438964 E7EUB6 86 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 ATP1A1-AS1Q5TC04 95 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 PNKDQ8N490 385 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 SLC25A33Q9BSK2 321 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 TMPRSS3P57727 454 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
ACTN1-204ENST00000438964 GSX1Q9H4S2 264 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-204ENST00000438964 MRPL27Q9P0M9 148 aaKnown RBP10.89□□□□□ -0.67
ACTN1-204ENST00000438964 TNRC18O15417 2968 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-204ENST00000438964 IGKV1D-17A0A075B6S4 117 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 C7orf71A4D174 169 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 FAM231BA6NCW3 169 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 FBLL1A6NHQ2 334 aaKnown RBP10.88□□□□□ -0.67
ACTN1-204ENST00000438964 C21orf140B9A014 251 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 NCR2O95944 276 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 PPBPP02775 128 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 ORM2P19652 201 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 IGHV1-2P23083 117 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CT45A1Q5HYN5 189 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CLEC2AQ6UVW9 174 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 BHLHA15Q7RTS1 189 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CT45A3Q8NHU0 189 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CHODLQ9H9P2 273 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 B4GALT7Q9UBV7 327 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 HSBP1L1C9JCN9 74 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 MOSP00540 346 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CXCL12P48061 93 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms