RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ATP5SQ99766 215 aa7.57□□□□□ -1.2
CUBN-204ENST00000438254 SMIM3Q9BZL3 60 aa7.57□□□□□ -1.2
CUBN-204ENST00000438254 C16orf95Q9H693 158 aa7.57□□□□□ -1.2
CUBN-204ENST00000438254 MRPL36Q9P0J6 103 aaKnown RBP7.57□□□□□ -1.2
CUBN-204ENST00000438254 LINC00527Q9UJ94 153 aa7.57□□□□□ -1.2
CUBN-204ENST00000438254 LSM4Q9Y4Z0 139 aaKnown RBP7.57□□□□□ -1.2
CUBN-204ENST00000438254 MAST4O15021 2626 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 KANTRA0A1W2PQU2 76 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 F8W735 103 aaPredicted RBP7.56□□□□□ -1.2
CUBN-204ENST00000438254 H3BUA1 57 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 IGHG4P01861 327 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 IFNA4P05014 189 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 EXOSC2Q13868 293 aaKnown RBP7.56□□□□□ -1.2
CUBN-204ENST00000438254 GAMTQ14353 236 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 RPL7L1Q6DKI1 246 aaKnown RBP7.56□□□□□ -1.2
CUBN-204ENST00000438254 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 MYOZ3Q8TDC0 251 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 TAF15Q92804 592 aaKnown RBP eCLIP7.56□□□□□ -1.2
CUBN-204ENST00000438254 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 WDR83OSQ9Y284 106 aa7.56□□□□□ -1.2
CUBN-204ENST00000438254 IGKV1OR2-108A0A075B7D4 117 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 TMEM89A2RUT3 159 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 TCF21O43680 179 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 DFFBO76075 338 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 JTBO76095 146 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 NDUFB8O95169 186 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 NDUFA7O95182 113 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 MT-CO2P00403 227 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
CUBN-204ENST00000438254 PSMB8P28062 276 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 IFITM2Q01629 132 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 KIAA0141Q14154 515 aaPredicted RBP7.55□□□□□ -1.2
CUBN-204ENST00000438254 ZNF266Q14584 549 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 CLINT1Q14677 625 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 SLC25A24Q6NUK1 477 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 SLC16A13Q7RTY0 426 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
CUBN-204ENST00000438254 RNF152Q8N8N0 203 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 TMEM116Q8NCL8 245 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 ZNF414Q96IQ9 312 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 GINS3Q9BRX5 216 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 WDR61Q9GZS3 305 aaKnown RBP7.55□□□□□ -1.2
CUBN-204ENST00000438254 ZC4H2Q9NQZ6 224 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 UQCC1Q9NVA1 299 aa7.55□□□□□ -1.2
CUBN-204ENST00000438254 PAIP2BQ9ULR5 123 aaKnown RBP7.55□□□□□ -1.2
CUBN-204ENST00000438254 NF1P21359 2839 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 MFSD2BA6NFX1 497 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 CFDP00746 253 aaPredicted RBP7.54□□□□□ -1.2
CUBN-204ENST00000438254 DEFA4P12838 97 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 C4BPBP20851 252 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 FCGR2BP31994 310 aaPredicted RBP7.54□□□□□ -1.2
CUBN-204ENST00000438254 OPRK1P41145 380 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 LILRB2Q8N423 598 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 THAP8Q8NA92 274 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 OR4X1Q8NH49 305 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 OR2T6Q8NHC8 308 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 VN1R17PQ8TDU5 208 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 SCARB1Q8WTV0 552 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 ST8SIA2Q92186 375 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 MISP3Q96FF7 219 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 GON7Q9BXV9 100 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
CUBN-204ENST00000438254 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 NPVFQ9HCQ7 196 aa7.54□□□□□ -1.2
CUBN-204ENST00000438254 UBE2L5PA0A1B0GUS4 154 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 FAM223BA6NKX1 122 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 OR2J3O76001 311 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 IGHV3-48P01763 117 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 SPP1P10451 314 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 RHOGP84095 191 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 DEFA5Q01523 94 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 ETFRF1Q6IPR1 90 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 FAM223AQ8IWN6 122 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 BAP18Q8IXM2 172 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 LINC01006Q8NI28 216 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 ATP6V0BQ99437 205 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 MGST2Q99735 147 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
CUBN-204ENST00000438254 SLA2Q9H6Q3 261 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 THYN1Q9P016 225 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 FBXL7Q9UJT9 491 aa7.53□□□□□ -1.2
CUBN-204ENST00000438254 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 PSMB11A5LHX3 300 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 CYB5BO43169 146 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 MPDU1O75352 247 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 ELANEP08246 267 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 IGLC1P0CG04 106 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 TPT1P13693 172 aaKnown RBP7.52□□□□□ -1.21
CUBN-204ENST00000438254 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 RAB9AP51151 201 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 RND2P52198 227 aa7.52□□□□□ -1.21
CUBN-204ENST00000438254 RUNX1Q01196 453 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms