RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 SPG11Q96JI7 2443 aa13.32□□□□□ -0.28
GSE1-206ENST00000438180 J3QLI3 93 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 COL8A1P27658 744 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 TAS2R45P59539 299 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 BPIFB3P59826 476 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 Q8N9W7 124 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 OR1L4Q8NGR5 311 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 GATAD1Q8WUU5 269 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 TRGV9Q99603 122 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 TXNDC17Q9BRA2 123 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 SLC25A33Q9BSK2 321 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
GSE1-206ENST00000438180 MEGF9Q9H1U4 602 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
GSE1-206ENST00000438180 KMT2BQ9UMN6 2715 aaPredicted RBP13.31□□□□□ -0.28
GSE1-206ENST00000438180 FBP1P09467 338 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 LOXL1Q08397 574 aaPredicted RBP13.3□□□□□ -0.28
GSE1-206ENST00000438180 FAM120AOSQ5T036 256 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 CYB561D1Q8N8Q1 229 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 ARL14EPLP0DKL9 152 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 CEBPGP53567 150 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 SPNS3Q6ZMD2 512 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 SUN5Q8TC36 379 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 NIPSNAP3BQ9BS92 247 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 TNFRSF19Q9NS68 423 aa13.3□□□□□ -0.28
GSE1-206ENST00000438180 TECRQ9NZ01 308 aaKnown RBP13.3□□□□□ -0.28
GSE1-206ENST00000438180 TMEM250H0YL14 139 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 FABP1P07148 127 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 OR5G3P0C626 314 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 RUSC1-AS1Q66K80 236 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 MBD6Q96DN6 1003 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 SEPSECSQ9HD40 501 aaKnown RBP13.29□□□□□ -0.28
GSE1-206ENST00000438180 THYN1Q9P016 225 aa13.29□□□□□ -0.28
GSE1-206ENST00000438180 A0A096LNT2 108 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 I3L2K1 104 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 COX7A2P2O60397 106 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
GSE1-206ENST00000438180 NPBWR1P48145 328 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 RHEBQ15382 184 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 PQLC2Q6ZP29 291 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 OR4X1Q8NH49 305 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 FAM103A1Q9BTL3 118 aaKnown RBP13.28□□□□□ -0.28
GSE1-206ENST00000438180 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
GSE1-206ENST00000438180 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 IGHV3OR16-10A0A075B7F0 116 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.28
GSE1-206ENST00000438180 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 M0R036 132 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 PDE6DO43924 150 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 PAGE4O60829 102 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 CLN5O75503 358 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 KRTAP10-9P60411 292 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 TMEM68Q96MH6 324 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 MOB4Q9Y3A3 225 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 ARL2-SNX15V9GYD0 113 aa13.27□□□□□ -0.28
GSE1-206ENST00000438180 ANKRD17O75179 2603 aaKnown RBP13.27□□□□□ -0.29
GSE1-206ENST00000438180 A0A0U1RQK1 487 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 IGHV4-38-2P0DP08 117 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.29
GSE1-206ENST00000438180 GCHFRP30047 84 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 FAM74A3Q4VXF1 159 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 Q5PR19 223 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.27□□□□□ -0.29
GSE1-206ENST00000438180 RBM14Q96PK6 669 aaKnown RBP13.27□□□□□ -0.29
GSE1-206ENST00000438180 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.29
GSE1-206ENST00000438180 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 SCGB2A1O75556 95 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
GSE1-206ENST00000438180 CD81P60033 236 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 NDPQ00604 133 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 AWAT1Q58HT5 328 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 C10orf113Q5VZT2 155 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 OR4F5Q8NH21 305 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 SGMS2Q8NHU3 365 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
GSE1-206ENST00000438180 MRPL36Q9P0J6 103 aaKnown RBP13.26□□□□□ -0.29
GSE1-206ENST00000438180 PUS1Q9Y606 427 aaKnown RBP eCLIP13.26□□□□□ -0.29
GSE1-206ENST00000438180 UTP20O75691 2785 aaKnown RBP13.26□□□□□ -0.29
GSE1-206ENST00000438180 F6UZH7 168 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 H3BQ15 152 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 C8orf88P0DMB2 117 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 ZNF90Q03938 601 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 PNRC1Q12796 327 aaPredicted RBP13.25□□□□□ -0.29
GSE1-206ENST00000438180 SPATA31B1PQ5VZV4 182 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 FAM90A2PQ658T7 463 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
GSE1-206ENST00000438180 C5orf56Q8N8D9 126 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms