RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ERVS71-1P61550 626 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 NCALDP61601 193 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 EMX2Q04743 252 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 ARHGAP11BQ3KRB8 267 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 LIN52Q52LA3 116 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 LAMTOR1Q6IAA8 161 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 TMPPEQ6ZT21 453 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 AAED1Q7RTV5 226 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 GRINAQ7Z429 371 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 MTERF4Q7Z6M4 381 aaKnown RBP1.72□□□□□ -2.13
LINC00353-201ENST00000435401 LRRC34Q8IZ02 419 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 MUC15Q8N387 334 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 RIBC1Q8N443 379 aaPredicted RBP1.72□□□□□ -2.13
LINC00353-201ENST00000435401 C3orf22Q8N5N4 141 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 Q8NAQ8 132 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 PIGXQ8TBF5 258 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 CCDC124Q96CT7 223 aaKnown RBP1.72□□□□□ -2.13
LINC00353-201ENST00000435401 DDIT4LQ96D03 193 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 MUCL1Q96DR8 90 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 ZHX1-C8orf76Q96EF9 292 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 TSPAN32Q96QS1 320 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 B9D2Q9BPU9 175 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 WFDC6Q9BQY6 131 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 FAAP24Q9BTP7 215 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 BPESC1Q9GZL8 116 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 CACYBPQ9HB71 228 aaKnown RBP1.72□□□□□ -2.13
LINC00353-201ENST00000435401 DYNLRB1Q9NP97 96 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 MED29Q9NX70 200 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 NKIRAS1Q9NYS0 192 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 TAS2R7Q9NYW3 318 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 CCDC167Q9P0B6 97 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 CREBBPQ92793 2442 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 AKAP9Q99996 3911 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 USP9YO00507 2555 aaPredicted RBP1.72□□□□□ -2.13
LINC00353-201ENST00000435401 ARFGEF3Q5TH69 2177 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 MALRD1Q5VYJ5 2156 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 NAV2Q8IVL1 2488 aa1.72□□□□□ -2.13
LINC00353-201ENST00000435401 RTTNQ86VV8 2226 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 CFAP46Q8IYW2 2715 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 ZNF469Q96JG9 3925 aaPredicted RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 MYO9AB2RTY4 2548 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SETXQ7Z333 2677 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 A0A1B0GU33 70 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 A0A1B0GX12 115 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 A0A1W2PNM2 257 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 C5orf58C9J3I9 102 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 H3BQF6 201 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 H7C1C5 153 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 KALRNO60229 2985 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 OR4A8P0C604 315 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 NQO2P16083 231 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 ZNF22P17026 224 aaPredicted RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 RPS4Y1P22090 263 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 GRPRP30550 384 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 PYCR1P32322 319 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SNRPD2P62316 118 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 LCN6P62502 163 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 PSPHP78330 225 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 RAB31Q13636 194 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 C1DQ13901 141 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 FLOT2Q14254 428 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 TMEM249Q2WGJ8 235 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SPRNQ5BIV9 151 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 TIMM23BQ5SRD1 257 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 C6orf52Q5T4I8 152 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 C1orf140Q5VVS0 124 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SMARCD3Q6STE5 483 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 MSRB3Q8IXL7 192 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SELENOHQ8IZQ5 122 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 HS3ST5Q8IZT8 346 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 LRRC18Q8N456 261 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 CLDN22Q8N7P3 220 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SPERTQ8NA61 448 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 BPIFB6Q8NFQ5 453 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 OR4D11Q8NGI4 311 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 PFN4Q8NHR9 129 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 CASTOR1Q8WTX7 329 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 DYDC1Q8WWB3 177 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 TESCQ96BS2 214 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 MRAP2Q96G30 205 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 CCDC115Q96NT0 180 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 DHRS9Q9BPW9 319 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 RERGLQ9H628 205 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 TPT1P8Q9HAU6 139 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 TREM1Q9NP99 234 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 CBLN4Q9NTU7 201 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 ACER3Q9NUN7 267 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 PAQR5Q9NXK6 330 aaPredicted RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 EMC3Q9P0I2 261 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 SLC35A3Q9Y2D2 325 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 V9GYQ6 96 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 ANKRD17O75179 2603 aaKnown RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 ABCA2Q9BZC7 2435 aa1.71□□□□□ -2.14
LINC00353-201ENST00000435401 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
LINC00353-201ENST00000435401 DSPPQ9NZW4 1301 aa1.7□□□□□ -2.14
LINC00353-201ENST00000435401 CADP27708 2225 aa1.7□□□□□ -2.14
LINC00353-201ENST00000435401 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
LINC00353-201ENST00000435401 A0A096LNT2 108 aa1.7□□□□□ -2.14
LINC00353-201ENST00000435401 A0A096LPI6 279 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms