RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 ZNF788Q6ZQV5 615 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 Q6ZWC4 215 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 MIR17HGQ75NE6 70 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 STPG3Q8N7X2 389 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 RNASE6Q93091 150 aaKnown RBP12.7□□□□□ -0.38
SCARF1-203ENST00000434376 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 GGCTO75223 188 aaKnown RBP12.7□□□□□ -0.38
SCARF1-203ENST00000434376 Q6ZVH6 145 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 ERASQ7Z444 233 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 SFRP2Q96HF1 295 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 CBY1Q9Y3M2 126 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 SNURFLB1AK76 121 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 SSBP2P81877 361 aaPredicted RBP12.69□□□□□ -0.38
SCARF1-203ENST00000434376 MMDQ15546 238 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 OR5AU1Q8NGC0 362 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 FCN3O75636 299 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 MOSP00540 346 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 RAB4AP20338 218 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 ARF6P62330 175 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 OR10G8Q8NGN5 311 aa12.69□□□□□ -0.38
SCARF1-203ENST00000434376 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
SCARF1-203ENST00000434376 LHBP01229 141 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
SCARF1-203ENST00000434376 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
SCARF1-203ENST00000434376 COA6Q5JTJ3 125 aaKnown RBP12.68□□□□□ -0.38
SCARF1-203ENST00000434376 WNT10AQ9GZT5 417 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 NDUFS7O75251 213 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
SCARF1-203ENST00000434376 ORM2P19652 201 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 AMTP48728 403 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 GGTLC1Q9BX51 225 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 APOA2P02652 100 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 RAB7AP51149 207 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 HES1Q14469 280 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 FXYD3Q14802 87 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 LEMD1Q68G75 181 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 BLNKQ8WV28 456 aa12.68□□□□□ -0.38
SCARF1-203ENST00000434376 RAI1Q7Z5J4 1906 aaPredicted RBP12.67□□□□□ -0.38
SCARF1-203ENST00000434376 VSTM5A8MXK1 200 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
SCARF1-203ENST00000434376 RNF151Q2KHN1 245 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 ASCL2Q99929 193 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
SCARF1-203ENST00000434376 IGHV3OR16-8A0A075B7F1 116 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 CD3EP07766 207 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 RBPJQ06330 500 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 TNXAQ16473 311 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 HLA-DRB5Q30154 266 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
SCARF1-203ENST00000434376 DNAJC4Q9NNZ3 241 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 CSMD2Q7Z408 3487 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 CELSR2Q9HCU4 2923 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 IGHV3-35A0A0C4DH35 117 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 PAX1P15863 534 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 TEPPQ6URK8 271 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 OR8I2Q8N0Y5 310 aa12.67□□□□□ -0.38
SCARF1-203ENST00000434376 IGHV1-69-2A0A0G2JMI3 117 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 C15orf61A6NNL5 157 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 P0C879 139 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 SUMO1P63165 101 aaKnown RBP12.66□□□□□ -0.38
SCARF1-203ENST00000434376 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
SCARF1-203ENST00000434376 Q6ZN92 141 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 MUC15Q8N387 334 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 FAM19A2Q8N3H0 131 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 PNKDQ8N490 385 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
SCARF1-203ENST00000434376 TMEM178BH3BS89 294 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 SFTPCP11686 197 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 NPIPB3Q92617 1050 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 ELOVL5Q9NYP7 299 aa12.66□□□□□ -0.38
SCARF1-203ENST00000434376 ZANQ9Y493 2812 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 PIGBOS1A0A0B4J2F0 54 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 F2RL2O00254 374 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 NBL1P41271 181 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 PDLIM4P50479 330 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 NPVFQ9HCQ7 196 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 VPS13CQ709C8 3753 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 TRBV20OR9-2A0A075B6H5 130 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 RPP30P78346 268 aaKnown RBP12.65□□□□□ -0.38
SCARF1-203ENST00000434376 TEX50A0A1B0GTY4 177 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 CRYBB3P26998 211 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 BRS3P32247 399 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 VDAC2P45880 294 aaPredicted RBP12.65□□□□□ -0.38
SCARF1-203ENST00000434376 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
SCARF1-203ENST00000434376 RPL15P61313 204 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms