RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 HIST3H2BBQ8N257 126 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 ABHD12Q8N2K0 398 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 STPG3Q8N7X2 389 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 ZNF114Q8NC26 417 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 OR2T10Q8NGZ9 312 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 OR9G1Q8NH87 305 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 GATAD1Q8WUU5 269 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 RND1Q92730 232 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 UHRF2Q96PU4 802 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 NDUFA4L2Q9NRX3 87 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 TMEM106BQ9NUM4 274 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 FUT9Q9Y231 359 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 TP53TG5Q9Y2B4 290 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 URGCP-MRPS24S4R325 110 aa6.03□□□□□ -1.44
COL17A1-204ENST00000433822 APCP25054 2843 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TEX50A0A1B0GTY4 177 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 A0A1W2PRE2 83 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SHISA9B4DS77 424 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 NDUFB3O43676 98 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 OR10J4P0C629 311 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 LINC00869P0C866 280 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TRGC1P0CF51 173 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SAA1P0DJI8 122 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 NPPCP23582 126 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 APOBEC3AP31941 199 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SUB1P53999 127 aaKnown RBP eCLIP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SLURP1P55000 103 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 NDUFA6P56556 154 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SELENOTP62341 195 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 RPL8P62917 257 aaKnown RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 RPL19P84098 196 aaKnown RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TBR1Q16650 682 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 COX19Q49B96 90 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 ACTL10Q5JWF8 245 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 FAM201AQ5SY85 155 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 MIC13Q5XKP0 118 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TMEM183AQ8IXX5 376 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 VKORC1L1Q8N0U8 176 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TEX45Q8NA69 505 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 FRZBQ92765 325 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 HARBI1Q96MB7 349 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 RNF5Q99942 180 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 NABP2Q9BQ15 211 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 SRSF8Q9BRL6 282 aaKnown RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 TECRQ9NZ01 308 aaKnown RBP6.02□□□□□ -1.45
COL17A1-204ENST00000433822 WASHC3Q9Y3C0 194 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 CCDC168Q8NDH2 2452 aa6.02□□□□□ -1.45
COL17A1-204ENST00000433822 CSMD2Q7Z408 3487 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 ZGRF1Q86YA3 2104 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 TRBV9A0A0B4J1U6 114 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 MDFIC2A0A1B0GVS7 189 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 IFITM10A6NMD0 228 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 DVL1O14640 695 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 MMP23AO75900 390 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 FABP1P07148 127 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 NDUFB7P17568 137 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 LOXP28300 417 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-204ENST00000433822 ATP5G3P48201 142 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 GNG10P50151 68 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 CCL8P80075 99 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 VMA21Q3ZAQ7 101 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 SPINK9Q5DT21 86 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 TMEM200BQ69YZ2 307 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 ETFRF1Q6IPR1 90 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 DUX4L9Q6RFH8 374 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-204ENST00000433822 THAP8Q8NA92 274 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 OR4X1Q8NH49 305 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 C8orf46Q8TAG6 207 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 FLYWCH2Q96CP2 140 aaKnown RBP6.01□□□□□ -1.45
COL17A1-204ENST00000433822 SFRP2Q96HF1 295 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 PFDN5Q99471 154 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 MRPL20Q9BYC9 149 aaKnown RBP6.01□□□□□ -1.45
COL17A1-204ENST00000433822 COMMD5Q9GZQ3 224 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 NIT2Q9NQR4 276 aa6.01□□□□□ -1.45
COL17A1-204ENST00000433822 PSMB11A5LHX3 300 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 SRRM4A7MD48 611 aaKnown RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 E7EQL1 145 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 CORTO00230 105 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 NDUFB4O95168 129 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 IGHV2-70P01814 119 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 IGKV1-16P04430 117 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 C8orf88P0DMB2 117 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 HIST1H1BP16401 226 aaKnown RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 IGFBP2P18065 325 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 PPOXP50336 477 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 CASP6P55212 293 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 YPEL3P61236 119 aaPredicted RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 GAMTQ14353 236 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 GCSAMLQ5JQS6 135 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 CST9LP1Q5W188 147 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 TEX38Q6PEX7 206 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 SLC16A13Q7RTY0 426 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 BEND2Q8NDZ0 799 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 DEFB108BQ8NET1 73 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 STXBP6Q8NFX7 210 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 OR4P4Q8NGL7 312 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 OR1L4Q8NGR5 311 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 OR10X1Q8NGY0 326 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms