RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TIMM9Q9Y5J7 89 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 IGLV11-55A0A075B6I3 123 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 RUNX1Q01196 453 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 AKR1C1Q04828 323 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 GAMTQ14353 236 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 C19orf54Q5BKX5 351 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 TMEM144Q7Z5S9 345 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 CENPVQ7Z7K6 275 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-206ENST00000431390 SH3BGRL3Q9H299 93 aa14.31□□□□□ -0.12
HMGN1-206ENST00000431390 LSM4Q9Y4Z0 139 aaKnown RBP14.31□□□□□ -0.12
HMGN1-206ENST00000431390 TRAV41A0A0B4J266 112 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 AP4M1O00189 453 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 HIST1H1BP16401 226 aaKnown RBP14.3□□□□□ -0.12
HMGN1-206ENST00000431390 MLANAQ16655 118 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 TEPPQ6URK8 271 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 BTNL8Q6UX41 500 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 OR5T1Q8NG75 326 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 FANCD2OSQ96PS1 177 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 NPFFR1Q9GZQ6 430 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 THYN1Q9P016 225 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 I3L2K1 104 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 MT-CO2P00403 227 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 OR2G3Q8NGZ4 309 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 LRRC20Q8TCA0 184 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 RSG1Q9BU20 258 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 NPCDR1Q9BY65 106 aa14.3□□□□□ -0.12
HMGN1-206ENST00000431390 C17orf112F2Z3M2 114 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 G3V318 75 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 SULT1A2P50226 295 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 SERF2P84101 59 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 FAM74A1Q5RGS3 127 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 ZNF709Q8N972 641 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 OR2T6Q8NHC8 308 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 RNF141Q8WVD5 230 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 PRSS22Q9GZN4 317 aa14.29□□□□□ -0.12
HMGN1-206ENST00000431390 DNAJC9-AS1A6NH13 148 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 CLDN34H7C241 214 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 SOX15O60248 233 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 PRH1P02810 166 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 RAB14P61106 215 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 RAB31Q13636 194 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 Q6ZS46 218 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 TMEM116Q8NCL8 245 aa14.28□□□□□ -0.12
HMGN1-206ENST00000431390 UMAD1C9J7I0 102 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 TRIM77I1YAP6 450 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 K7EIM0 57 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 RAB5CP51148 216 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 CLLU1Q5K131 121 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 ACY3Q96HD9 319 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 MGST2Q99735 147 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 KCNIP2Q9NS61 270 aa14.27□□□□□ -0.12
HMGN1-206ENST00000431390 TRBV9A0A0B4J1U6 114 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 BRI3O95415 125 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 PPIFP30405 207 aaKnown RBP14.26□□□□□ -0.13
HMGN1-206ENST00000431390 CAMLGP49069 296 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 RND2P52198 227 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 TMEM182Q6ZP80 229 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-206ENST00000431390 THAP8Q8NA92 274 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 ZNF418Q8TF45 676 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-206ENST00000431390 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 GGTLC1Q9BX51 225 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 PLA2G2EQ9NZK7 142 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 RFNGQ9Y644 331 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 IGKV1OR2-108A0A075B7D4 117 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 H3BUA1 57 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 AGPAT2O15120 278 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 Q8N2B8 174 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 OR4X1Q8NH49 305 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 DUX5Q96PT3 197 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 ZNF702PQ9H963 129 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 MRPL36Q9P0J6 103 aaKnown RBP14.26□□□□□ -0.13
HMGN1-206ENST00000431390 LINC00527Q9UJ94 153 aa14.26□□□□□ -0.13
HMGN1-206ENST00000431390 IGHV3-48P01763 117 aa14.25□□□□□ -0.13
HMGN1-206ENST00000431390 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
HMGN1-206ENST00000431390 NOL4LQ96MY1 436 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-206ENST00000431390 ESM1Q9NQ30 184 aa14.25□□□□□ -0.13
HMGN1-206ENST00000431390 ZNF355PQ9NSJ1 428 aa14.25□□□□□ -0.13
HMGN1-206ENST00000431390 FBXL7Q9UJT9 491 aa14.25□□□□□ -0.13
HMGN1-206ENST00000431390 IGHV3-21A0A0B4J1V1 117 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 OR2J3O76001 311 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 NMBP08949 121 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 RPL29P47914 159 aaKnown RBP14.24□□□□□ -0.13
HMGN1-206ENST00000431390 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
HMGN1-206ENST00000431390 CFHR3Q02985 330 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 ACSM6Q6P461 480 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 DPPA3Q6W0C5 159 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 NECAP1Q8NC96 275 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 VN1R17PQ8TDU5 208 aa14.24□□□□□ -0.13
HMGN1-206ENST00000431390 SAT2Q96F10 170 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-206ENST00000431390 WIPF1O43516 503 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 NDUFB8O95169 186 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 MBP02144 154 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 OR10J1P30954 320 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 HILS1P60008 231 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 RHOGP84095 191 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 SLC45A2Q9UMX9 530 aa14.23□□□□□ -0.13
HMGN1-206ENST00000431390 IGKV1D-37A0A075B6S9 117 aa14.22□□□□□ -0.13
HMGN1-206ENST00000431390 TCRBV4S1A1TA0A5B7 111 aa14.22□□□□□ -0.13
HMGN1-206ENST00000431390 ZFP92A6NM28 416 aa14.22□□□□□ -0.13
HMGN1-206ENST00000431390 ZNF705EA8MWA4 302 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms