RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 NUBP2Q9Y5Y2 271 aa2.5□□□□□ -2.01
PTPN4-204ENST00000431283 PEX16Q9Y5Y5 336 aa2.5□□□□□ -2.01
PTPN4-204ENST00000431283 NUPR2A6NF83 97 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 OR11H12B2RN74 326 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 J3QRE1 110 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 FCN1O00602 326 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 SOX15O60248 233 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 YPEL1O60688 119 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 CRTAPO75718 401 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 OR2A4O95047 310 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 APOA2P02652 100 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 MAS1P04201 325 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 SAA2P0DJI9 122 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 RCC1P18754 421 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 POLR2IP36954 125 aaKnown RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 MAP2K4P45985 399 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 ADARB1P78563 741 aaKnown RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 CBX3Q13185 183 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 UNC119Q13432 240 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 MED21Q13503 144 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 FXYD3Q14802 87 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 PSG5Q15238 335 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 GUCA2BQ16661 112 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 LY6G6FQ5SQ64 297 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 RPL22L1Q6P5R6 122 aaKnown RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 GLIPR1L1Q6UWM5 242 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 FAM131AQ6UXB0 335 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 ZNF833PQ6ZTB9 187 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 JAGN1Q8N5M9 183 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 OR5T1Q8NG75 326 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 DYNLRB2Q8TF09 96 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 IL1F10Q8WWZ1 152 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 THRSPQ92748 146 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 CENPNQ96H22 339 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 YPEL2Q96QA6 119 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 PHB2Q99623 299 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 FAM103A1Q9BTL3 118 aaKnown RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 SELENOIQ9C0D9 397 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 RETNQ9HD89 108 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 METTL1Q9UBP6 276 aaKnown RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 GHRLQ9UBU3 117 aa2.49□□□□□ -2.01
PTPN4-204ENST00000431283 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-204ENST00000431283 IRGMA1A4Y4 181 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 ERICH4A6NGS2 130 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 H0YJW9 148 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 PDCD6O75340 191 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CIB2O75838 187 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 SC5DO75845 299 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 BRI3O95415 125 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 BAG2O95816 211 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CA2P00918 260 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 IGHV3-48P01763 117 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CT45A6P0DMU7 189 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CT45A5P0DMU8 189 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CT45A7P0DMV0 189 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 MYL12AP19105 171 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 MAPK3P27361 379 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-204ENST00000431283 APOC4P55056 127 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 ATP5G2Q06055 141 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 GNMTQ14749 295 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 RPL39P5Q59GN2 51 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 YIF1BQ5BJH7 314 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 C1orf146Q5VVC0 180 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CEMP1Q6PRD7 247 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-204ENST00000431283 PDPNQ86YL7 162 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 CDH26Q8IXH8 852 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 GAPTQ8N292 157 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 DEFB125Q8N687 156 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 NKAIN3Q8N8D7 197 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 SMIM19Q96E16 107 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 RBMXL1Q96E39 390 aaKnown RBP2.48□□□□□ -2.01
PTPN4-204ENST00000431283 FAM210BQ96KR6 192 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 SULT4A1Q9BR01 284 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 UQCC2Q9BRT2 126 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 IFI27L2Q9H2X8 130 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 BANF2Q9H503 90 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 BABAM2Q9NXR7 383 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 COA4Q9NYJ1 87 aa2.48□□□□□ -2.01
PTPN4-204ENST00000431283 EXOSC1Q9Y3B2 195 aaKnown RBP2.48□□□□□ -2.01
PTPN4-204ENST00000431283 KIAA1109Q2LD37 5005 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 DSCAML1Q8TD84 2053 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 IGHV1OR15-1A0A075B7D0 117 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 LOC102724200A0A096LPH7 203 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 FAM223BA6NKX1 122 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 ITGB1BP1O14713 200 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 CREBL2O60519 120 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 IGKV1-16P04430 117 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 CD7P09564 240 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 GSTT2P0CG29 244 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 GSTT2BP0CG30 244 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 UBBP0CG47 229 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 RRASP10301 218 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 IGFBP3P17936 291 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 DCKP27707 260 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 BMI1P35226 326 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 CEACAM6P40199 344 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 RANBP1P43487 201 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 KIR2DS2P43631 304 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 GTF2A1P52655 376 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms