RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 LCN12Q6JVE5 192 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF705AQ6ZN79 300 aaPredicted RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF843Q8N446 348 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 KIR3DL3Q8N743 410 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 NOL4LQ96MY1 436 aaPredicted RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 MRPL20Q9BYC9 149 aaKnown RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 NPVFQ9HCQ7 196 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 PLSCR4Q9NRQ2 329 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 PSMB11A5LHX3 300 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 SH2D7A6NKC9 451 aaPredicted RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 A8MXE2 369 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 M0QZ24 198 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 BMPR1BO00238 502 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 LCE2BO14633 110 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 OR7C2O60412 319 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 IGHV1-46P01743 117 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 CD99P14209 185 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 PMCHP20382 165 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 GPR6P46095 362 aaPredicted RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 ERVK-16P61578 105 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 HSPE1P61604 102 aaKnown RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 SUMO1P63165 101 aaKnown RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 BATFQ16520 125 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TMEM249Q2WGJ8 235 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 STUMQ69YW2 141 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 PATE2Q6UY27 113 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TMEM136Q6ZRR5 245 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 OR52E5Q8NH55 327 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 C11orf52Q96A22 123 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 FAM167A-AS1Q96KT0 104 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 IGF2BP2-AS1Q96M15 143 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 SSBP4Q9BWG4 385 aaPredicted RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 GSX1Q9H4S2 264 aaPredicted RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 FOXA2Q9Y261 457 aaPredicted RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TRGV8A0A0C4DH27 118 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 KBTBD11-OT1A0A1B0GTJ5 212 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 J3QR06 171 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 RNASE2P10153 161 aaKnown RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 CRISP2P16562 243 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 WT1-ASQ06250 92 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 BEND2Q8NDZ0 799 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 OR4S2Q8NH73 311 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 SLC25A2Q9BXI2 301 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 WNT10AQ9GZT5 417 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TECRQ9NZ01 308 aaKnown RBP5.81□□□□□ -1.48
COL28A1-202ENST00000430711 ACACAQ13085 2346 aa5.81□□□□□ -1.48
COL28A1-202ENST00000430711 TRGV10A0A0A0MS01 117 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 IGHV3-72A0A0B4J1Y9 119 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 MGST1P10620 155 aaKnown RBP5.8□□□□□ -1.48
COL28A1-202ENST00000430711 KRTDAPP60985 99 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 MRGPRG-AS1Q2M3A8 158 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 LYPD2Q6UXB3 125 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 LINC00322Q6ZN03 302 aaPredicted RBP5.8□□□□□ -1.48
COL28A1-202ENST00000430711 TEX43Q6ZNM6 134 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 NIT1Q86X76 327 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 SFXN3Q9BWM7 321 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 PROCRQ9UNN8 238 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 TBL2Q9Y4P3 447 aaKnown RBP5.8□□□□□ -1.48
COL28A1-202ENST00000430711 IGKV1D-37A0A075B6S9 117 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 PIGBOS1A0A0B4J2F0 54 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 A0A1W2PS18 150 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 UPK2O00526 184 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 MPDU1O75352 247 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 FSTL3O95633 263 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 MOSP00540 346 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF25P17030 456 aaPredicted RBP5.8□□□□□ -1.48
COL28A1-202ENST00000430711 CNTFRP26992 372 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 SRIP30626 198 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 MFAP2P55001 183 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 KLF3P57682 345 aaPredicted RBP5.8□□□□□ -1.48
COL28A1-202ENST00000430711 SSTP61278 116 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 RHOBP62745 196 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 LEMD1Q68G75 181 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 BAGE3Q86Y29 109 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 BAGE2Q86Y30 109 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 TCTEX1D1Q8N7M0 179 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 CDC42EP3Q9UKI2 254 aa5.8□□□□□ -1.48
COL28A1-202ENST00000430711 ANKRD17O75179 2603 aaKnown RBP5.79□□□□□ -1.48
COL28A1-202ENST00000430711 HELTA6NFD8 242 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 ISLRO14498 428 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 AREGP15514 252 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 GNG4P50150 75 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 PRCDQ00LT1 54 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 PMCHL1Q16048 86 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 RPEL1Q2QD12 228 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 PRR27Q6MZM9 219 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 C1orf162Q8NEQ5 155 aaPredicted RBP5.79□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF355PQ9NSJ1 428 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 SLC35D1Q9NTN3 355 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 IGLV3-9A0A075B6K5 115 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 FAM90A9PA6NNJ1 464 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 C22orf46C9J442 243 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 C9JCJ5 164 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 GPX1P07203 203 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 FTH1P19P0C7X4 201 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 TNFAIP6P98066 277 aaPredicted RBP5.79□□□□□ -1.48
COL28A1-202ENST00000430711 FOXE3Q13461 319 aa5.79□□□□□ -1.48
COL28A1-202ENST00000430711 FBLN7Q53RD9 439 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms