RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
HDAC4-202ENST00000430200 TMEM222Q9H0R3 208 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 CXorf65A6NEN9 183 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 TMEM50AO95807 157 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 IFNA17P01571 189 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 BMI1P35226 326 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 LEMD1Q68G75 181 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 ZNF600Q6ZNG1 722 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 GALNT14Q96FL9 552 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 NAA60Q9H7X0 242 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 COPZ2Q9P299 210 aa8.63□□□□□ -1.03
HDAC4-202ENST00000430200 CRYM-AS1A6NIL9 109 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 RGS5O15539 181 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 CDS2O95674 445 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
HDAC4-202ENST00000430200 ERHP84090 104 aaKnown RBP8.62□□□□□ -1.03
HDAC4-202ENST00000430200 TIGITQ495A1 244 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 GPR141Q7Z602 305 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
HDAC4-202ENST00000430200 SELENOHQ8IZQ5 122 aaKnown RBP8.62□□□□□ -1.03
HDAC4-202ENST00000430200 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 GPR146Q96CH1 333 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 CACNG5Q9UF02 275 aa8.62□□□□□ -1.03
HDAC4-202ENST00000430200 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 UBE2CO00762 179 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 DEFB4AO15263 64 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 CLN5O75503 358 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 C4BPBP20851 252 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 SNCAP37840 140 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 OPRK1P41145 380 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 DEFB131AP59861 70 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 SUPT4H1P63272 117 aaKnown RBP8.61□□□□□ -1.03
HDAC4-202ENST00000430200 TMEM268Q5VZI3 342 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 STPG3Q8N7X2 389 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 OR51S1Q8NGJ8 323 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 SLIRPQ9GZT3 109 aaKnown RBP8.61□□□□□ -1.03
HDAC4-202ENST00000430200 CCDC59Q9P031 241 aaKnown RBP8.61□□□□□ -1.03
HDAC4-202ENST00000430200 GPR132Q9UNW8 380 aa8.61□□□□□ -1.03
HDAC4-202ENST00000430200 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
HDAC4-202ENST00000430200 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 H3BMQ9 156 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 K7EQG2 157 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 CTDSPLO15194 276 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 NPBWR1P48145 328 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 RND2P52198 227 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 IL18Q14116 193 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 RBMS2Q15434 407 aaKnown RBP8.6□□□□□ -1.03
HDAC4-202ENST00000430200 USF2Q15853 346 aaPredicted RBP8.6□□□□□ -1.03
HDAC4-202ENST00000430200 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 CEMP1Q6PRD7 247 aaPredicted RBP8.6□□□□□ -1.03
HDAC4-202ENST00000430200 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 DUSP18Q8NEJ0 188 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 OR4X1Q8NH49 305 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 ZFAND1Q8TCF1 268 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 RBPMSQ93062 196 aaKnown RBP8.6□□□□□ -1.03
HDAC4-202ENST00000430200 GINS3Q9BRX5 216 aa8.6□□□□□ -1.03
HDAC4-202ENST00000430200 NUPR2A6NF83 97 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 CA1P00915 261 aaPredicted RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 AKAIN1P0CW23 69 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 CRYBB3P26998 211 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 P2RY1P47900 373 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 NANOS2P60321 138 aaKnown RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 SPCS3P61009 180 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 TMEM187Q14656 261 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 NMSQ5H8A3 153 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 RPP25LQ8N5L8 163 aaKnown RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 TRIM63Q969Q1 353 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
HDAC4-202ENST00000430200 SOSTQ9BQB4 213 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 PDCD10Q9BUL8 212 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 U3KQE9 123 aa8.59□□□□□ -1.03
HDAC4-202ENST00000430200 HERC2O95714 4834 aa8.59□□□□□ -1.04
HDAC4-202ENST00000430200 KNCNA6PVL3 124 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 MPTX1A8MV57 137 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 CORTO00230 105 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 GSTZ1O43708 216 aaPredicted RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 DEDDO75618 318 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 LY6G6CO95867 125 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 ZNF688P0C7X2 276 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 RPL5P46777 297 aaKnown RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 SURF2Q15527 256 aaPredicted RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 C2orf83Q53S99 150 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 TRPT1Q86TN4 253 aaKnown RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 Q8NAQ8 132 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 SLC24A4Q8NFF2 622 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 STXBP6Q8NFX7 210 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms