RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 NEIL2Q969S2 332 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 BTF3L4Q96K17 158 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF75AQ96N20 296 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CIB3Q96Q77 187 aaPredicted RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 SLC25A21Q9BQT8 299 aaPredicted RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 PYGO2Q9BRQ0 406 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 HINT2Q9BX68 163 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 SLC35B3Q9H1N7 401 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 OR52D1Q9H346 318 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 PATZ1Q9HBE1 687 aaKnown RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 FKBP11Q9NYL4 201 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 UQCR10Q9UDW1 63 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF391Q9UJN7 358 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 MCTS1Q9ULC4 181 aaKnown RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 DNAJC15Q9Y5T4 150 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 URGCP-MRPS24S4R325 110 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 RYR3Q15413 4870 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 IGKV1D-8A0A087WSZ0 117 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 IGKV3D-11A0A0A0MRZ8 115 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 A0A0G2JMM0 328 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 A0A0G2JRQ6 117 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 A0A1B0GU03 582 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 A0A1W2PPB8 328 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SLC22A20A6NK97 555 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 KIR3DP1A8MWS1 328 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 K7N7A8 449 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RAB29O14966 203 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 MRPS12O15235 138 aaKnown RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 PDE6DO43924 150 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 YPEL1O60688 119 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 MT-ND4P03905 459 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TRGC2P03986 189 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 OPN1SWP03999 348 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 HPNP05981 417 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 EIF4EP06730 217 aaKnown RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RBMY1CP0DJD4 496 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 PGA3P0DJD8 388 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 AKR1C4P17516 323 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 USF1P22415 310 aaPredicted RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 AQP1P29972 269 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 GABRA3P34903 492 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 GABRA2P47869 451 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 DLX1P56177 255 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 PIGPP57054 158 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RAB38P57729 211 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RUNX1Q01196 453 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF763Q0D2J5 394 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 KIAA0040Q15053 153 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RGNQ15493 299 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 C15orf32Q32M92 178 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 DEFB134Q4QY38 66 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TRMT12Q53H54 448 aaKnown RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 LY6G6FQ5SQ64 297 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF678Q5SXM1 525 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TPTE2P1Q5T6R2 138 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 STUMQ69YW2 141 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SFXN4Q6P4A7 337 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TNFAIP8L2Q6P589 184 aaPredicted RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 WDR82Q6UXN9 313 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF550Q7Z398 422 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 KRTAP7-1Q8IUC3 87 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 RNF175Q8N4F7 328 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 INO80EQ8NBZ0 244 aaPredicted RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF485Q8NCK3 441 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF740Q8NDX6 193 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 OR2Z1Q8NG97 314 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 OR10G4Q8NGN3 311 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 OR10X1Q8NGY0 326 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 MARCH1Q8TCQ1 289 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 GPR119Q8TDV5 335 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TNFAIP8L1Q8WVP5 186 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 DDIT4LQ96D03 193 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 YPEL2Q96QA6 119 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TSPAN32Q96QS1 320 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SIGMAR1Q99720 223 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SCRT1Q9BWW7 348 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 TMEM59Q9BXS4 323 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 BEX1Q9HBH7 125 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SH2D2AQ9NP31 389 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 OR2S2Q9NQN1 319 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 PRTFDC1Q9NRG1 225 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SLC7A10Q9NS82 523 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 KCNIP1Q9NZI2 227 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF107Q9UII5 783 aaPredicted RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 FUT9Q9Y231 359 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 SIGLEC7Q9Y286 467 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ARHGAP21Q5T5U3 1957 aa3.01□□□□□ -1.93
HMGB3-203ENST00000430118 PRKDCP78527 4128 aaKnown RBP3.01□□□□□ -1.93
HMGB3-203ENST00000430118 ARID1AO14497 2285 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 SCN2AQ99250 2005 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 RAI1Q7Z5J4 1906 aaPredicted RBP3□□□□□ -1.93
HMGB3-203ENST00000430118 IGHV2-26A0A0B4J1V2 119 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 TRAV1-2A0A0B4J238 106 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 TRAV38-1A0A0B4J264 116 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 IGKV1-8A0A0C4DH67 115 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 H7BYZ3 331 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CLDN34H7C241 214 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms