RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	NAA60	Q9H7X0	242 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	C14orf166	Q9Y224	244 aa	Known RBP	13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	IGHV3-49	A0A0A0MS15	119 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	DISC1	C4P0D8	188 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	HOXA1	P49639	335 aa	Predicted RBP	13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	SUB1	P53999	127 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	5e-8	■■■■■ 37.7
MRPL28-203	ENST00000429738	IL18	Q14116	193 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	ZNF600	Q6ZNG1	722 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	OR52E5	Q8NH55	327 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	RBPMS	Q93062	196 aa	Known RBP	13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	GALNT14	Q96FL9	552 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	GINS3	Q9BRX5	216 aa		13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	MRPL36	Q9P0J6	103 aa	Known RBP	13.1	□□□□□ -0.31
MRPL28-203	ENST00000429738	DNAH10	Q8IVF4	4471 aa		13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	CRYM-AS1	A6NIL9	109 aa		13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	GSTZ1	O43708	216 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	RPL5	P46777	297 aa	Known RBP	13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	SPCS3	P61009	180 aa		13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	SELENOH	Q8IZQ5	122 aa	Known RBP	13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	SOST	Q9BQB4	213 aa		13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	SLIRP	Q9GZT3	109 aa	Known RBP	13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
MRPL28-203	ENST00000429738	IGHV3OR16-13	A0A075B7E8	117 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	IGHV3-74	A0A0B4J1X5	117 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738		A0A1B0GU03	582 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	ANKRD20A5P	A0PJZ0	165 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	SPRY2	O43597	315 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	CLN5	O75503	358 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	APOH	P02749	345 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	CD5	P06127	495 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	BMI1	P35226	326 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	CMC4	P56277	68 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	DHODH	Q02127	395 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	TNFRSF9	Q07011	255 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	DEFB135	Q30KP9	77 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	LILRB2	Q8N423	598 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	OR4X1	Q8NH49	305 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	RNASE11	Q8TAA1	199 aa	Known RBP	13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	ST8SIA2	Q92186	375 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	RNF183	Q96D59	192 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	PRRT1	Q99946	306 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	MAP6D1	Q9H9H5	199 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	ENY2	Q9NPA8	101 aa		13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL28-203	ENST00000429738	ZNF124	Q15973	351 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	MLANA	Q16655	118 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	TCF24	Q7RTU0	167 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	APRG1	Q8IVJ8	170 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	STPG3	Q8N7X2	389 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	OR51S1	Q8NGJ8	323 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	GPR146	Q96CH1	333 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738	TMEM56-RWDD3	S4R434	201 aa		13.07	□□□□□ -0.32
MRPL28-203	ENST00000429738		A0A0J9YWU9	116 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738		H3BMQ9	156 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	RPL35A	P18077	110 aa	Known RBP	13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	OPRK1	P41145	380 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	HTR2B	P41595	481 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	TMEM230	Q96A57	120 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	CACNG5	Q9UF02	275 aa		13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	RSL24D1	Q9UHA3	163 aa	Known RBP	13.06	□□□□□ -0.32
MRPL28-203	ENST00000429738	IGKV3-7	A0A075B6H7	116 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	CXorf65	A6NEN9	183 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	ATF4	P18848	351 aa	Predicted RBP	13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	TFPI2	P48307	235 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	C2orf83	Q53S99	150 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	TMEM268	Q5VZI3	342 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	LYG2	Q86SG7	212 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	GBGT1	Q8N5D6	347 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	IL22RA2	Q969J5	263 aa		13.05	□□□□□ -0.32
MRPL28-203	ENST00000429738	TRAV2	A0A0B4J234	112 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	NUPR2	A6NF83	97 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	DFFB	O76075	338 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	IGKV1-17	P01599	117 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	TNFSF8	P32971	234 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	PAFAH1B2	P68402	229 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	PMS2P11	Q13670	270 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	TMEM187	Q14656	261 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	TMEM170A	Q8WVE7	144 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	MS4A6A	Q9H2W1	248 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	SCP2D1	Q9UJQ7	156 aa		13.04	□□□□□ -0.32
MRPL28-203	ENST00000429738	CRYBB3	P26998	211 aa		13.03	□□□□□ -0.32
MRPL28-203	ENST00000429738	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.03	□□□□□ -0.32
MRPL28-203	ENST00000429738	SLC24A4	Q8NFF2	622 aa		13.03	□□□□□ -0.32
MRPL28-203	ENST00000429738	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.03	□□□□□ -0.32
MRPL28-203	ENST00000429738	CSTL1	Q9H114	145 aa		13.03	□□□□□ -0.32
MRPL28-203	ENST00000429738	TRAV30	A0A087WSZ9	112 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	IGHV3-66	A0A0C4DH42	116 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	FABP12	A6NFH5	140 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	IGLC1	P0CG04	106 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	NPPC	P23582	126 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	SUPT4H1	P63272	117 aa	Known RBP	13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	NMS	Q5H8A3	153 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	PRSS54	Q6PEW0	395 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	SCGB3A2	Q96PL1	93 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	TMEM231	Q9H6L2	316 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738	HEYL	Q9NQ87	328 aa	Predicted RBP	13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms