RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LINC00696Q6ZRV3 163 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 SCNM1Q9BWG6 230 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 FOXQ1Q9C009 403 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 NPFFR1Q9GZQ6 430 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF585BQ52M93 769 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 CDCP2Q5VXM1 449 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF525Q8N782 197 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 SIT1Q9Y3P8 196 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 BRCA2P51587 3418 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 GNB2P62879 340 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 PSG5Q15238 335 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 SMRP1Q8NCR6 262 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 BGLAPP02818 100 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 CRYGCP07315 174 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TFPI2P48307 235 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TGIF1Q15583 401 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 C16orf47Q6ZP98 133 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 Q71RC1 249 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 CRXO43186 299 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM52Q8NDY8 209 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 LRP4O75096 1905 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF716A6NP11 495 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF32P17041 273 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 WNT10AQ9GZT5 417 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 IL9P15248 144 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 C18orf32Q8TCD1 76 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 ATOX1O00244 68 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 CKS2P33552 79 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM219Q86XT9 240 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 TET2Q6N021 2002 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 THSD7BQ9C0I4 1608 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 PDE6HQ13956 83 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 FOXB1Q99853 325 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 TRAV5A0A0B4J249 113 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 IGLC7A0M8Q6 106 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM258P61165 79 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF146Q15072 292 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM27BQ5VT28 67 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 LOC102724200A0A096LPH7 203 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 HOXA3O43365 443 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 HDHD3Q9BSH5 251 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 CRYBA4P53673 196 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 Q6ZWC4 215 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 H0YJW9 148 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 CDKN1AP38936 164 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 ID4P47928 161 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 C4orf51C9J302 202 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
SYNPO2-202ENST00000429713 RAI1Q7Z5J4 1906 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 H3BVH4 76 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SRD5A1P18405 259 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 ADMP35318 185 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 LINC00114Q6XXX2 140 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 OR1L8Q8NGR8 309 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 IL15RAQ13261 267 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM14EPQ6UXP3 125 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 C1orf122Q6ZSJ8 110 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 MRGPRFQ96AM1 343 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 GPR179Q6PRD1 2367 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SPINK4O60575 86 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 Q6Q795 121 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 FHL5Q5TD97 284 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 STPG3Q8N7X2 389 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM178AQ8NBL3 297 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SLC25A39Q9BZJ4 359 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 WDR54Q9H977 334 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 F2Z2F3 143 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 FGF12P61328 243 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 SPINK9Q5DT21 86 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 CENPVQ7Z7K6 275 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM140Q9NV12 185 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 PKD1L2Q7Z442 2459 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 NGFP01138 241 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 LINC00271P0C7V0 271 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 IGLC1P0CG04 106 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 NMSQ5H8A3 153 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 DEFB123Q8N688 67 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 OR4C13Q8NGP0 309 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF721Q8TF20 911 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 PF4V1P10720 104 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 GNB1P62873 340 aa6.35□□□□□ -1.39
SYNPO2-202ENST00000429713 TIMM23O14925 209 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 IL11RAQ14626 422 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 FSCN3Q9NQT6 498 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 PSG2P11465 335 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 CA6P23280 308 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 HLA-DMBP28068 263 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms