RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 UTF1Q5T230 341 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 LHFPL4Q7Z7J7 247 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 CLRN3Q8NCR9 226 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 OSR1Q8TAX0 266 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 ST6GALNAC6Q969X2 333 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 RSG1Q9BU20 258 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 EIF5A2Q9GZV4 153 aaKnown RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 FKBP11Q9NYL4 201 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 BET1LQ9NYM9 111 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 PRNDQ9UKY0 176 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 WDR83OSQ9Y284 106 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 FBXO7Q9Y3I1 522 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 A0A1W2PPH5 198 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 PRSS46E5RG02 174 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 H3BUX3 64 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 J3QR06 171 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 UPK2O00526 184 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 RBMXL2O75526 392 aaKnown RBP6.86□□□□□ -1.31
HDAC1-202ENST00000428704 IFNA17P01571 189 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
HDAC1-202ENST00000428704 IGHV1-8P0DP01 117 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR2B8PP59922 312 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 CCL20P78556 96 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM177Q53S58 311 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR4A47Q6IF82 309 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR11H6Q8NGC7 330 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR4A5Q8NH83 315 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 OR9G1Q8NH87 305 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 PIFOQ8TCI5 191 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 SFT2D1Q8WV19 159 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 LEAP2Q969E1 77 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 P2RX4Q99571 388 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 SLC35D1Q9NTN3 355 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 TCF19Q9Y242 345 aa6.86□□□□□ -1.31
HDAC1-202ENST00000428704 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 A0A1W2PPE3 182 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 RBMY1BA6NDE4 496 aaKnown RBP6.85□□□□□ -1.31
HDAC1-202ENST00000428704 RBMY1EA6NEQ0 496 aaKnown RBP6.85□□□□□ -1.31
HDAC1-202ENST00000428704 FAM74A7A6NL05 159 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 H7C2Y5 167 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 KBTBD11O94819 623 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 RBMY1DP0C7P1 496 aaKnown RBP6.85□□□□□ -1.31
HDAC1-202ENST00000428704 CD1BP29016 333 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 MC5RP33032 325 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 NPBWR1P48145 328 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 PPT1P50897 306 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 RAB11AP62491 216 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF726P1Q15940 193 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 FAM74A3Q4VXF1 159 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 PDPNQ86YL7 162 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
HDAC1-202ENST00000428704 OR4F17Q8NGA8 305 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 OR13D1Q8NGV5 346 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 OR5B3Q8NH48 314 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 OR5R1Q8NH85 324 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 CFHR4Q92496 578 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 OR4F4Q96R69 305 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 SSX3Q99909 188 aa6.85□□□□□ -1.31
HDAC1-202ENST00000428704 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
HDAC1-202ENST00000428704 IGHV2-26A0A0B4J1V2 119 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 TRAV3A0A0B4J244 114 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 CTXND1A0A1B0GTU2 59 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 UBE2L5PA0A1B0GUS4 154 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 LOC102723971A0A1B0GUV8 181 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 hCG_1809904A0A1W2PP81 198 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 A0A1W2PPE2 198 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 A0A1W2PR64 198 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 A0A1W2PRV1 198 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 H0YJW9 148 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 CYB5BO43169 146 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 IGHV3-7P01780 117 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 APOA2P02652 100 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 FGF7P21781 194 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 GNG10P50151 68 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 PRCDQ00LT1 54 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 ICAM4Q14773 271 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 RHEBQ15382 184 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 LY6EQ16553 131 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 BSXQ3C1V8 233 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 SOHLH1Q5JUK2 328 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 ETV3LQ6ZN32 361 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 SSX9Q7RTT3 188 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 OR4C13Q8NGP0 309 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 VSTM2AQ8TAG5 236 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 RCC1LQ96I51 464 aaKnown RBP6.84□□□□□ -1.31
HDAC1-202ENST00000428704 RARRES2Q99969 163 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 NABP2Q9BQ15 211 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 NPCDR1Q9BY65 106 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 ACTR3CQ9C0K3 210 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM133Q9H2Q1 129 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 VSIRQ9H7M9 311 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 NPVFQ9HCQ7 196 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 HEYLQ9NQ87 328 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-202ENST00000428704 SMCO4Q9NRQ5 59 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 508.2 ms