RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
SGCE-204ENST00000428696 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 ACY3Q96HD9 319 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 C2orf50Q96LR7 162 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 PSENENQ9NZ42 101 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 LSM5Q9Y4Y9 91 aaKnown RBP11.17□□□□□ -0.62
SGCE-204ENST00000428696 L7N2F9 121 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 TGOLN2O43493 480 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 NPBWR1P48145 328 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 S100A10P60903 97 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 VAMP2P63027 116 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 OR9G4Q8NGQ1 327 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 RNASEH2CQ8TDP1 164 aaKnown RBP11.16□□□□□ -0.62
SGCE-204ENST00000428696 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
SGCE-204ENST00000428696 C20orf24Q9BUV8 137 aa11.16□□□□□ -0.62
SGCE-204ENST00000428696 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
SGCE-204ENST00000428696 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
SGCE-204ENST00000428696 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 GPR61Q9BZJ8 451 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.62
SGCE-204ENST00000428696 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
SGCE-204ENST00000428696 ALG5Q9Y673 324 aa11.15□□□□□ -0.62
SGCE-204ENST00000428696 PRB2P02812 416 aaPredicted RBP11.14□□□□□ -0.63
SGCE-204ENST00000428696 BCAP31P51572 246 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 TXN2Q99757 166 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 MGAT4CQ9UBM8 478 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 RCL1Q9Y2P8 373 aaKnown RBP11.14□□□□□ -0.63
SGCE-204ENST00000428696 SELENOKQ9Y6D0 94 aa11.14□□□□□ -0.63
SGCE-204ENST00000428696 CMYA5Q8N3K9 4069 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
SGCE-204ENST00000428696 CTSGP08311 255 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 RND2P52198 227 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
SGCE-204ENST00000428696 LRRC37A5PQ49AS3 106 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
SGCE-204ENST00000428696 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
SGCE-204ENST00000428696 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
SGCE-204ENST00000428696 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 LY86O95711 162 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 TMEM50AO95807 157 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 RELQ04864 619 aaPredicted RBP11.12□□□□□ -0.63
SGCE-204ENST00000428696 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 SMIM8Q96KF7 97 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
SGCE-204ENST00000428696 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 K7EPK0 472 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 METTL15P1P0C7V9 234 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 SLC25A4P12235 298 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 PVALBP20472 110 aaPredicted RBP11.11□□□□□ -0.63
SGCE-204ENST00000428696 ADMP35318 185 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 CAV2P51636 162 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 DEFA6Q01524 100 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 RAB32Q13637 225 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 TIGITQ495A1 244 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 UNQ9165/PRO28630Q6UXU0 137 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 SLC35E1Q96K37 410 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 MED28Q9H204 178 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 NOTCH1P46531 2555 aa11.11□□□□□ -0.63
SGCE-204ENST00000428696 C7orf66A4D0T2 115 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 CLN5O75503 358 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 RLN2P04090 185 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 OR10J1P30954 320 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 CD69Q07108 199 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 UFC1Q9Y3C8 167 aa11.1□□□□□ -0.63
SGCE-204ENST00000428696 TRAV30A0A087WSZ9 112 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 NDUFA4O00483 81 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 CSN3P07498 182 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 FOLR2P14207 255 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 EDN2P20800 178 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 INSL3P51460 131 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 PAX9P55771 341 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 CYCSP99999 105 aaKnown RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 GAMTQ14353 236 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 BEAN1Q3B7T3 259 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 CACNG8Q8WXS5 425 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 ATP6V0BQ99437 205 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms