RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM268Q5VZI3 342 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 LAMTOR1Q6IAA8 161 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 FAM219AQ8IW50 185 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 DUSP18Q8NEJ0 188 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 MUC7Q8TAX7 377 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 RBPMSQ93062 196 aaKnown RBP7.08□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM230Q96A57 120 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 HIPK2Q9H2X6 1198 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 RETNQ9HD89 108 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 ENY2Q9NPA8 101 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 PRR13Q9NZ81 148 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM56-RWDD3S4R434 201 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 IGHV3OR16-13A0A075B7E8 117 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 TRAV14DV4A0A0A6YYC5 116 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 IGHV3-74A0A0B4J1X5 117 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 C15orf62A8K5M9 175 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 TSPAN4O14817 238 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 LYL1P12980 280 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 NPBWR1P48145 328 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 KLF9Q13886 244 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM187Q14656 261 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 AARDQ4LEZ3 155 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 SCGB3A2Q96PL1 93 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 RBM38Q9H0Z9 239 aaKnown RBP7.07□□□□□ -1.28
TRIM39-208ENST00000428555 FNDC4Q9H6D8 234 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-208ENST00000428555 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 HEYLQ9NQ87 328 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-208ENST00000428555 MRPL36Q9P0J6 103 aaKnown RBP7.07□□□□□ -1.28
TRIM39-208ENST00000428555 CACNG5Q9UF02 275 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 V9GYH0 126 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
TRIM39-208ENST00000428555 DYNC2H1Q8NCM8 4307 aaKnown RBP7.06□□□□□ -1.28
TRIM39-208ENST00000428555 IGHV7-4-1A0A0J9YVY3 117 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 CEBPZOSA8MTT3 80 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 CHEK1O14757 476 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 S100A5P33763 92 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 SUPT4H1P63272 117 aaKnown RBP7.06□□□□□ -1.28
TRIM39-208ENST00000428555 ZNF79Q15937 498 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 BSXQ3C1V8 233 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 CASC10Q5T4H9 136 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 TOMM20LQ6UXN7 152 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 LYZL2Q7Z4W2 148 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 CCDC190Q86UF4 302 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 TOMM5Q8N4H5 51 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM116Q8NCL8 245 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 OR52E5Q8NH55 327 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 GALNT14Q96FL9 552 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 OR10C1Q96KK4 312 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 RNF2Q99496 336 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 SPAG8Q99932 426 aaPredicted RBP7.06□□□□□ -1.28
TRIM39-208ENST00000428555 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 UBQLN2Q9UHD9 624 aa7.06□□□□□ -1.28
TRIM39-208ENST00000428555 SACSQ9NZJ4 4579 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 A0A1B0GU03 582 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 NXPH3O95157 252 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 APOHP02749 345 aaPredicted RBP7.05□□□□□ -1.28
TRIM39-208ENST00000428555 OPRK1P41145 380 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 HTR2BP41595 481 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 SUN5Q8TC36 379 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 IL22RA2Q969J5 263 aa7.05□□□□□ -1.28
TRIM39-208ENST00000428555 PUS1Q9Y606 427 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM39-208ENST00000428555 IGKV3-7A0A075B6H7 116 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
TRIM39-208ENST00000428555 IGHV3-66A0A0C4DH42 116 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 OR4C46A6NHA9 309 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 ZNF701M0R085 212 aaPredicted RBP7.04□□□□□ -1.28
TRIM39-208ENST00000428555 CORTO00230 105 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 CLN5O75503 358 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 SULT1A3P0DMM9 295 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 SULT1A4P0DMN0 295 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 FAUP35544 74 aaKnown RBP7.04□□□□□ -1.28
TRIM39-208ENST00000428555 TFPI2P48307 235 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 AP3S2P59780 193 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 NMSQ5H8A3 153 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 ZNF600Q6ZNG1 722 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 TMED4Q7Z7H5 227 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 LGI3Q8N145 548 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 GBGT1Q8N5D6 347 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 OR4X1Q8NH49 305 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM170AQ8WVE7 144 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 GINS3Q9BRX5 216 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 GGTLC1Q9BX51 225 aa7.04□□□□□ -1.28
TRIM39-208ENST00000428555 A0A0B4J2A0 478 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 DFFBO76075 338 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 IGKV1-17P01599 117 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 ANXA3P12429 323 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 CCR6P51684 374 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 SMCO1Q147U7 214 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 ODF3L2Q3SX64 289 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 TIGITQ495A1 244 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 C2orf83Q53S99 150 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM128Q5BJH2 165 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 PRSS54Q6PEW0 395 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms