RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 APOC4P55056 127 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 ZNF124Q15973 351 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 MLANAQ16655 118 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 APRG1Q8IVJ8 170 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 SELENOHQ8IZQ5 122 aaKnown RBP13.64□□□□□ -0.23
PSPC1-202ENST00000427943 GBGT1Q8N5D6 347 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 PRRT1Q99946 306 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 RABL2AQ9UBK7 228 aaPredicted RBP13.64□□□□□ -0.23
PSPC1-202ENST00000427943 RABL2BQ9UNT1 228 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 PUS1Q9Y606 427 aaKnown RBP eCLIP13.64□□□□□ -0.23
PSPC1-202ENST00000427943 IGHV3-66A0A0C4DH42 116 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 TMEM50AO95807 157 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 APOHP02749 345 aaPredicted RBP13.63□□□□□ -0.23
PSPC1-202ENST00000427943 SPCS3P61009 180 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 DHODHQ02127 395 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 MCFD2Q8NI22 146 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 ST8SIA2Q92186 375 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
PSPC1-202ENST00000427943 RSL24D1Q9UHA3 163 aaKnown RBP13.63□□□□□ -0.23
PSPC1-202ENST00000427943 A0A1B0GU03 582 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 TNFSF8P32971 234 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 BSXQ3C1V8 233 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 TMEM230Q96A57 120 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.62□□□□□ -0.23
PSPC1-202ENST00000427943 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
PSPC1-202ENST00000427943 FABP12A6NFH5 140 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 CLN5O75503 358 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 AARDQ4LEZ3 155 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 LILRB2Q8N423 598 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 GALNT14Q96FL9 552 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 MAP6D1Q9H9H5 199 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
PSPC1-202ENST00000427943 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
PSPC1-202ENST00000427943 CEBPZOSA8MTT3 80 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 SPRY2O43597 315 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 BMI1P35226 326 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 TMEM187Q14656 261 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 Q6ZWC4 215 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 WFDC3Q8IUB2 231 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 STPG3Q8N7X2 389 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 SOSTQ9BQB4 213 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
PSPC1-202ENST00000427943 KIR2DL5BA0A0G2JN68 375 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 KIR2DL5BA0A0G2JPC4 375 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 A0A0J9YWU9 116 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 HTR2BP41595 481 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 TIGITQ495A1 244 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 KIR2DL5AQ8N109 375 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 TP53TG1Q9Y2A0 90 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 TMEM56-RWDD3S4R434 201 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
PSPC1-202ENST00000427943 UBE2CO00762 179 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 DFFBO76075 338 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 AKR1C4P17516 323 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
PSPC1-202ENST00000427943 PAFAH1B2P68402 229 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 EWSR1Q01844 656 aaKnown RBP eCLIP13.58□□□□□ -0.24
PSPC1-202ENST00000427943 C2orf83Q53S99 150 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 LYG2Q86SG7 212 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 IL22RA2Q969J5 263 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 MS4A6AQ9H2W1 248 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 KCNIP3Q9Y2W7 256 aa13.58□□□□□ -0.24
PSPC1-202ENST00000427943 RPS10-NUDT3A0A1W2PQS6 291 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 CCDC160A6NGH7 325 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 IGKV1-17P01599 117 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 RND2P52198 227 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 SUPT4H1P63272 117 aaKnown RBP13.57□□□□□ -0.24
PSPC1-202ENST00000427943 PMS2P11Q13670 270 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 FAM24BQ8N5W8 94 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 TRIM63Q969Q1 353 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 RNF183Q96D59 192 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 SCGB3A2Q96PL1 93 aa13.57□□□□□ -0.24
PSPC1-202ENST00000427943 AGRNO00468 2067 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 DNASE2O00115 360 aaPredicted RBP13.56□□□□□ -0.24
PSPC1-202ENST00000427943 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 JTBO76095 146 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 NPPCP23582 126 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 NPY1RP25929 384 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 CMC4P56277 68 aaPredicted RBP13.56□□□□□ -0.24
PSPC1-202ENST00000427943 PYDC2Q56P42 97 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 TMEM170AQ8WVE7 144 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 METTL26Q96S19 204 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 RABAC1Q9UI14 185 aa13.56□□□□□ -0.24
PSPC1-202ENST00000427943 CD5P06127 495 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 IGLC1P0CG04 106 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 DEFB131AP59861 70 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms