RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 IGHV3OR16-13A0A075B7E8 117 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 IGHV3-74A0A0B4J1X5 117 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 SCGB2A1O75556 95 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 TMEM50AO95807 157 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 AKR1C4P17516 323 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 S100A5P33763 92 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 FAUP35544 74 aaKnown RBP13.73□□□□□ -0.21
GPC1-205ENST00000427506 TOMM20LQ6UXN7 152 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 ZNF600Q6ZNG1 722 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
GPC1-205ENST00000427506 NXPH3O95157 252 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 BMI1P35226 326 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 HTR2BP41595 481 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 TFPI2P48307 235 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 AP3S2P59780 193 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 TMEM230Q96A57 120 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
GPC1-205ENST00000427506 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
GPC1-205ENST00000427506 RPS10-NUDT3A0A1W2PQS6 291 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 APOC4P55056 127 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 TMEM187Q14656 261 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 MLANAQ16655 118 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 ODF3L2Q3SX64 289 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 AARDQ4LEZ3 155 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 TOMM5Q8N4H5 51 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 IL22RA2Q969J5 263 aa13.71□□□□□ -0.21
GPC1-205ENST00000427506 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.21
GPC1-205ENST00000427506 KMT2CQ8NEZ4 4911 aaKnown RBP13.7□□□□□ -0.22
GPC1-205ENST00000427506 CLN5O75503 358 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 ANXA3P12429 323 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 PAFAH1B2P68402 229 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 OR4X1Q8NH49 305 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 IL17DQ8TAD2 202 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
GPC1-205ENST00000427506 CMC4P56277 68 aaPredicted RBP13.69□□□□□ -0.22
GPC1-205ENST00000427506 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
GPC1-205ENST00000427506 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 TMED4Q7Z7H5 227 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 SLC24A4Q8NFF2 622 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 ST8SIA2Q92186 375 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
GPC1-205ENST00000427506 V9GYH0 126 aa13.69□□□□□ -0.22
GPC1-205ENST00000427506 TRAV30A0A087WSZ9 112 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 IGHV3-66A0A0C4DH42 116 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 A0A1B0GU03 582 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 APOHP02749 345 aaPredicted RBP13.68□□□□□ -0.22
GPC1-205ENST00000427506 CD5P06127 495 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
GPC1-205ENST00000427506 NPPCP23582 126 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 RPL11P62913 178 aaKnown RBP13.68□□□□□ -0.22
GPC1-205ENST00000427506 SRPXP78539 464 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 C2orf83Q53S99 150 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 LYZL2Q7Z4W2 148 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 WFDC3Q8IUB2 231 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 APRG1Q8IVJ8 170 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 LGI3Q8N145 548 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 TRIM63Q969Q1 353 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 OVOL2Q9BRP0 275 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
GPC1-205ENST00000427506 DNASE2O00115 360 aaPredicted RBP13.67□□□□□ -0.22
GPC1-205ENST00000427506 NPY1RP25929 384 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 CCR6P51684 374 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
GPC1-205ENST00000427506 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 TIGITQ495A1 244 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 NOXA1Q86UR1 476 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
GPC1-205ENST00000427506 VSIRQ9H7M9 311 aa13.67□□□□□ -0.22
GPC1-205ENST00000427506 UBE2CO00762 179 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 DFFBO76075 338 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 IFNA10P01566 189 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 SLC25A4P12235 298 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 ZNF79Q15937 498 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 NMSQ5H8A3 153 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 NARS2Q96I59 477 aaKnown RBP13.66□□□□□ -0.22
GPC1-205ENST00000427506 METTL26Q96S19 204 aa13.66□□□□□ -0.22
GPC1-205ENST00000427506 RBM38Q9H0Z9 239 aaKnown RBP13.66□□□□□ -0.22
GPC1-205ENST00000427506 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 KIR2DL5BA0A0G2JN68 375 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 KIR2DL5BA0A0G2JPC4 375 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 A0A1W2PS18 150 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 SPRY2O43597 315 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 RND2P52198 227 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 SPANXN2Q5MJ10 180 aa13.65□□□□□ -0.22
GPC1-205ENST00000427506 Q6ZWC4 215 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms