RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 C19orf84I3L1E1 186 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 CEACAM3P40198 252 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 SELENOTP62341 195 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 RELBQ01201 579 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 TEX45Q8NA69 505 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 OR4A16Q8NH70 328 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 NABP2Q9BQ15 211 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
SH3D19-204ENST00000427414 WASHC3Q9Y3C0 194 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 LOC105371242A0A075B767 164 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 C17orf112F2Z3M2 114 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 H0YJW9 148 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 UPK2O00526 184 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 MPDU1O75352 247 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 FOXH1O75593 365 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 USF1P22415 310 aaPredicted RBP6.91□□□□□ -1.3
SH3D19-204ENST00000427414 G6PCP35575 357 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
SH3D19-204ENST00000427414 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 HSPE1P61604 102 aaKnown RBP6.91□□□□□ -1.3
SH3D19-204ENST00000427414 SIGLECL1Q8N7X8 197 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 OR10X1Q8NGY0 326 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 SPTBN4Q9H254 2564 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 IGHV2-26A0A0B4J1V2 119 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 A0A1W2PPV4 95 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 DIRC3C9JPN6 131 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 F2Z2F3 143 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 FCN1O00602 326 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 RBMXL2O75526 392 aaKnown RBP6.9□□□□□ -1.3
SH3D19-204ENST00000427414 MMP23AO75900 390 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 ESDP10768 282 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 SUMO1P63165 101 aaKnown RBP6.9□□□□□ -1.3
SH3D19-204ENST00000427414 PAX2Q02962 417 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 GCSAMLQ5JQS6 135 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 STPG4Q8N801 248 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 OR4B1Q8NGF8 309 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM167AQ8TBQ9 72 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 TXN2Q99757 166 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 UBTD1Q9HAC8 227 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 KCNIP2Q9NS61 270 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM140Q9NV12 185 aa6.9□□□□□ -1.3
SH3D19-204ENST00000427414 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
SH3D19-204ENST00000427414 PRR14LQ5THK1 2151 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 A0A1W2PPR1 153 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 ODF3BA8MYP8 253 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 VWC2LB2RUY7 222 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 OR5G3P0C626 314 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 CCL3L1P16619 93 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 CD1BP29016 333 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 VDAC2P45880 294 aaPredicted RBP6.9□□□□□ -1.31
SH3D19-204ENST00000427414 COTL1Q14019 142 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 SPATA45Q537H7 98 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.31
SH3D19-204ENST00000427414 FLYWCH2Q96CP2 140 aaKnown RBP6.9□□□□□ -1.31
SH3D19-204ENST00000427414 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.31
SH3D19-204ENST00000427414 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 A0A1W2PN81 502 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 PMS2P5A8MQ11 134 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 BUB1B-PAK6H3BSN5 160 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 SLC17A3O00476 420 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 IER3P46695 156 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 Q6ZN92 141 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 OCC1Q8TAD7 63 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 ZDHHC16Q969W1 377 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 RNF2Q99496 336 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 QTRT1Q9BXR0 403 aaKnown RBP6.89□□□□□ -1.31
SH3D19-204ENST00000427414 ZNF586Q9NXT0 402 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 DOCK11Q5JSL3 2073 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 SNURFLB1AK76 121 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 CCL25O15444 150 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 PRCDQ00LT1 54 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 LTC4SQ16873 150 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 VMA21Q3ZAQ7 101 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 SPINK9Q5DT21 86 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 LEMD1Q68G75 181 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 OR4A47Q6IF82 309 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 C22orf15Q8WYQ4 148 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
SH3D19-204ENST00000427414 RNF114Q9Y508 228 aa6.89□□□□□ -1.31
SH3D19-204ENST00000427414 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 NDUFB8O95169 186 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 GPX1P07203 203 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
SH3D19-204ENST00000427414 RBX1P62877 108 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 PVRIGQ6DKI7 326 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
SH3D19-204ENST00000427414 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 PIMREGQ9BSJ6 248 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 LAMTOR2Q9Y2Q5 125 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 IGHV2-70DA0A0C4DH43 119 aa6.88□□□□□ -1.31
SH3D19-204ENST00000427414 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms