RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 TENM3Q9P273 2699 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 LOC102724200A0A096LPH7 203 aaPredicted RBP8.03□□□□□ -1.12
LINC01238-202ENST00000426962 OPRK1P41145 380 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 KLF9Q13886 244 aaPredicted RBP8.03□□□□□ -1.12
LINC01238-202ENST00000426962 MLANAQ16655 118 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 TOMM20LQ6UXN7 152 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 ZNF600Q6ZNG1 722 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 CCDC190Q86UF4 302 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 OR4X1Q8NH49 305 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 DEDD2Q8WXF8 326 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 RNF2Q99496 336 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 GINS3Q9BRX5 216 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 RBM38Q9H0Z9 239 aaKnown RBP8.03□□□□□ -1.12
LINC01238-202ENST00000426962 FNDC4Q9H6D8 234 aaPredicted RBP8.03□□□□□ -1.12
LINC01238-202ENST00000426962 HEYLQ9NQ87 328 aaPredicted RBP8.03□□□□□ -1.12
LINC01238-202ENST00000426962 V9GYH0 126 aa8.03□□□□□ -1.12
LINC01238-202ENST00000426962 KMT2CQ8NEZ4 4911 aaKnown RBP8.02□□□□□ -1.13
LINC01238-202ENST00000426962 TRAV30A0A087WSZ9 112 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 A0A0B4J2A0 478 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 PIGBOS1A0A0B4J2F0 54 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 OR4C46A6NHA9 309 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 CEBPZOSA8MTT3 80 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 CLN5O75503 358 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 CD5P06127 495 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 SULT1A3P0DMM9 295 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 SULT1A4P0DMN0 295 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 ANXA3P12429 323 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 BMI1P35226 326 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 CMC4P56277 68 aaPredicted RBP8.02□□□□□ -1.13
LINC01238-202ENST00000426962 SUPT4H1P63272 117 aaKnown RBP8.02□□□□□ -1.13
LINC01238-202ENST00000426962 C2orf83Q53S99 150 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 NMSQ5H8A3 153 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 TRIM63Q969Q1 353 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 FAM110AQ9BQ89 295 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 RETNQ9HD89 108 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 UBQLN2Q9UHD9 624 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 SHPKQ9UHJ6 478 aa8.02□□□□□ -1.13
LINC01238-202ENST00000426962 IGHV3-49A0A0A0MS15 119 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 RPS10-NUDT3A0A1W2PQS6 291 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 SCGB2A1O75556 95 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 CCR6P51684 374 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 SRPXP78539 464 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 ZNF79Q15937 498 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 TMEM128Q5BJH2 165 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 FAM90A2PQ658T7 463 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 LYZL2Q7Z4W2 148 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 NOXA1Q86UR1 476 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 LGI3Q8N145 548 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 RNASEH2CQ8TDP1 164 aaKnown RBP8.01□□□□□ -1.13
LINC01238-202ENST00000426962 SLC25A21Q9BQT8 299 aaPredicted RBP8.01□□□□□ -1.13
LINC01238-202ENST00000426962 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 PRR13Q9NZ81 148 aa8.01□□□□□ -1.13
LINC01238-202ENST00000426962 PUS1Q9Y606 427 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC01238-202ENST00000426962 IGHV3OR16-13A0A075B7E8 117 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 IGHV3-74A0A0B4J1X5 117 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 A0A1B0GU03 582 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 SLC25A4P12235 298 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 NPPCP23582 126 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 TNFRSF9Q07011 255 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 SMCO1Q147U7 214 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 ODF3L2Q3SX64 289 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 SPANXN2Q5MJ10 180 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 ETFRF1Q6IPR1 90 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 SLC24A4Q8NFF2 622 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 MRPL36Q9P0J6 103 aaKnown RBP8□□□□□ -1.13
LINC01238-202ENST00000426962 U3KQ87 197 aa8□□□□□ -1.13
LINC01238-202ENST00000426962 IGKV3-7A0A075B6H7 116 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 DUXBA0A1W2PPF3 345 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 A0A1W2PS18 150 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 UBE2CO00762 179 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 NXPH3O95157 252 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 APOHP02749 345 aaPredicted RBP7.99□□□□□ -1.13
LINC01238-202ENST00000426962 NPY1RP25929 384 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 APOC4P55056 127 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
LINC01238-202ENST00000426962 TCF24Q7RTU0 167 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 TMED4Q7Z7H5 227 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 LILRB2Q8N423 598 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 ST8SIA2Q92186 375 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 TMEM231Q9H6L2 316 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 HSPB7Q9UBY9 170 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
LINC01238-202ENST00000426962 KIR2DL5BA0A0G2JN68 375 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 KIR2DL5BA0A0G2JPC4 375 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 DNASE2O00115 360 aaPredicted RBP7.98□□□□□ -1.13
LINC01238-202ENST00000426962 DFFBO76075 338 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 IFNA10P01566 189 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 IGKV1-17P01599 117 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 CRYBB3P26998 211 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 TFPI2P48307 235 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 TIGITQ495A1 244 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 ZFAND6Q6FIF0 208 aa7.98□□□□□ -1.13
LINC01238-202ENST00000426962 PRSS54Q6PEW0 395 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms