RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 INPP1P49441 399 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 LGI3Q8N145 548 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 SPAG8Q99932 426 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 SLC25A21Q9BQT8 299 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 RYR3Q15413 4870 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 TSPAN4O14817 238 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 BSXQ3C1V8 233 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 SRRQ9GZT4 340 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 WFDC10AQ9H1F0 79 aa13.11□□□□□ -0.31
SLC6A1-202ENST00000425938 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 CCR6P51684 374 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 TMEM128Q5BJH2 165 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 TRIQKQ629K1 86 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 OR10C1Q96KK4 312 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 HIPK2Q9H2X6 1198 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 SMPXQ9UHP9 88 aa13.1□□□□□ -0.31
SLC6A1-202ENST00000425938 TRAV14DV4A0A0A6YYC5 116 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 VAMP1P23763 118 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 BMI1P35226 326 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 SMCO1Q147U7 214 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 ZNF600Q6ZNG1 722 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 NOXA1Q86UR1 476 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 SLC24A4Q8NFF2 622 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 DNAH7Q8WXX0 4024 aa13.09□□□□□ -0.31
SLC6A1-202ENST00000425938 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 OR4C46A6NHA9 309 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 CLN5O75503 358 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 NXPH3O95157 252 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 TMEM50AO95807 157 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 C2orf83Q53S99 150 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 MUC7Q8TAX7 377 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 ZNF414Q96IQ9 312 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 RHPN1-AS1Q9BWJ2 59 aa13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 FNDC4Q9H6D8 234 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-202ENST00000425938 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 CHEK1O14757 476 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 NPY1RP25929 384 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 TNFRSF9Q07011 255 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 OR1S1Q8NH92 325 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 CITED4Q96RK1 184 aa13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 PUS1Q9Y606 427 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC6A1-202ENST00000425938 TRAV30A0A087WSZ9 112 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 A0A1B0GU03 582 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 SLC25A4P12235 298 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 MLANAQ16655 118 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 RNF2Q99496 336 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 MRPL36Q9P0J6 103 aaKnown RBP13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 HSPB7Q9UBY9 170 aa13.06□□□□□ -0.32
SLC6A1-202ENST00000425938 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 IFNA10P01566 189 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 CD5P06127 495 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 BAK1Q16611 211 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 GGTLC1Q9BX51 225 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 U3KQ87 197 aa13.05□□□□□ -0.32
SLC6A1-202ENST00000425938 IGHV3OR16-13A0A075B7E8 117 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 IGHV3-74A0A0B4J1X5 117 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 CENPXA8MT69 81 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 SFT2D2O95562 160 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 UBE2MP61081 183 aaKnown RBP13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 PPP1R1AQ13522 171 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 LRTM2Q8N967 370 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 RBKSQ9H477 322 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 UBQLN2Q9UHD9 624 aa13.04□□□□□ -0.32
SLC6A1-202ENST00000425938 NPPCP23582 126 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 RND2P52198 227 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 TIGITQ495A1 244 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 PRSS54Q6PEW0 395 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 OR1S2Q8NGQ3 325 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 METTL26Q96S19 204 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 RETNQ9HD89 108 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 TMED3Q9Y3Q3 217 aa13.03□□□□□ -0.32
SLC6A1-202ENST00000425938 IGKV3-7A0A075B6H7 116 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms