RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RCL1Q9Y2P8 373 aaKnown RBP18.74■□□□□ 0.59
VEGFA-209ENST00000425836 IFNA4P05014 189 aa18.73■□□□□ 0.59
VEGFA-209ENST00000425836 PAX9P55771 341 aa18.73■□□□□ 0.59
VEGFA-209ENST00000425836 SMIM8Q96KF7 97 aa18.73■□□□□ 0.59
VEGFA-209ENST00000425836 CHRDL1Q9BU40 450 aa18.73■□□□□ 0.59
VEGFA-209ENST00000425836 MCRIP2Q9BUT9 160 aaKnown RBP18.73■□□□□ 0.59
VEGFA-209ENST00000425836 GAR1Q9NY12 217 aaKnown RBP18.73■□□□□ 0.59
VEGFA-209ENST00000425836 RPS10-NUDT3A0A1W2PQS6 291 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 CTSGP08311 255 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 RPP30P78346 268 aaKnown RBP18.72■□□□□ 0.59
VEGFA-209ENST00000425836 SPANXN5Q5MJ07 72 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 GPHB5Q86YW7 130 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 C1QL4Q86Z23 238 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 RAB40CQ96S21 281 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 PSENENQ9NZ42 101 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 PAIP2BQ9ULR5 123 aaKnown RBP18.72■□□□□ 0.59
VEGFA-209ENST00000425836 MGAM2Q2M2H8 2515 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 G3V4G9 280 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 H3BP45 60 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 ADMP35318 185 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 NPBWR1P48145 328 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 RAB11AP62491 216 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 SPSB3Q6PJ21 355 aa18.72■□□□□ 0.59
VEGFA-209ENST00000425836 K7EPK0 472 aa18.71■□□□□ 0.59
VEGFA-209ENST00000425836 SAMD5Q5TGI4 173 aa18.71■□□□□ 0.59
VEGFA-209ENST00000425836 OR4X1Q8NH49 305 aa18.71■□□□□ 0.59
VEGFA-209ENST00000425836 STRAPQ9Y3F4 350 aaKnown RBP18.71■□□□□ 0.59
VEGFA-209ENST00000425836 LSM5Q9Y4Y9 91 aaKnown RBP18.71■□□□□ 0.59
VEGFA-209ENST00000425836 IGHV3-35A0A0C4DH35 117 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 SEC14L6B5MCN3 397 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 GNG7O60262 68 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 H2BFSP57053 126 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 TAS2R30P59541 319 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 CD69Q07108 199 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 ETFRF1Q6IPR1 90 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 PRSS54Q6PEW0 395 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 OR9G4Q8NGQ1 327 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 MGAT4CQ9UBM8 478 aa18.7■□□□□ 0.58
VEGFA-209ENST00000425836 NUPL2O15504 423 aaKnown RBP18.69■□□□□ 0.58
VEGFA-209ENST00000425836 SLC25A4P12235 298 aa18.69■□□□□ 0.58
VEGFA-209ENST00000425836 RAB32Q13637 225 aa18.69■□□□□ 0.58
VEGFA-209ENST00000425836 CLN5O75503 358 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 FAM106AQ4KMX7 169 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 IL34Q6ZMJ4 242 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 SLC16A13Q7RTY0 426 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 NMES1Q9C002 83 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 GPX4P36969 197 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-209ENST00000425836 S100A10P60903 97 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 TMEM116Q8NCL8 245 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 WDR89Q96FK6 387 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-209ENST00000425836 ZNF414Q96IQ9 312 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 ZNF436Q9C0F3 470 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-209ENST00000425836 C11orf1Q9H5F2 150 aa18.68■□□□□ 0.58
VEGFA-209ENST00000425836 LGALS9O00182 355 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 TSC22D2O75157 780 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 RND2P52198 227 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 CYCSP99999 105 aaKnown RBP18.67■□□□□ 0.58
VEGFA-209ENST00000425836 C9orf66Q5T8R8 295 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 UNQ9165/PRO28630Q6UXU0 137 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 REC114Q7Z4M0 266 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 ELOVL1Q9BW60 279 aa18.67■□□□□ 0.58
VEGFA-209ENST00000425836 ZNF320A2RRD8 509 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 PRSS46E5RG02 174 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 L7N2F9 121 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 VAMP2P63027 116 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 TMEM14EPQ6UXP3 125 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 CACNG8Q8WXS5 425 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 GPR61Q9BZJ8 451 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 PEMTQ9UBM1 199 aa18.66■□□□□ 0.58
VEGFA-209ENST00000425836 SAP30O75446 220 aa18.65■□□□□ 0.58
VEGFA-209ENST00000425836 NPIPB3Q92617 1050 aa18.65■□□□□ 0.58
VEGFA-209ENST00000425836 ACY3Q96HD9 319 aa18.65■□□□□ 0.58
VEGFA-209ENST00000425836 MED28Q9H204 178 aa18.65■□□□□ 0.58
VEGFA-209ENST00000425836 PMS2P5A8MQ11 134 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 NDUFA4O00483 81 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 WIPF1O43516 503 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 CSN3P07498 182 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 CXCL3P19876 107 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 RELQ04864 619 aaPredicted RBP18.64■□□□□ 0.58
VEGFA-209ENST00000425836 GAMTQ14353 236 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 FCN2Q15485 313 aa18.64■□□□□ 0.58
VEGFA-209ENST00000425836 NOTCH3Q9UM47 2321 aa18.64■□□□□ 0.57
VEGFA-209ENST00000425836 METTL15P1P0C7V9 234 aa18.64■□□□□ 0.57
VEGFA-209ENST00000425836 TMEM190Q8WZ59 177 aa18.64■□□□□ 0.57
VEGFA-209ENST00000425836 TRAV30A0A087WSZ9 112 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 CCNKO75909 580 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 IGKV1-17P01599 117 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 IGLC1P0CG04 106 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 PVALBP20472 110 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-209ENST00000425836 INSL3P51460 131 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 BEAN1Q3B7T3 259 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 KPRPQ5T749 579 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-209ENST00000425836 OR11H7Q8NGC8 314 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 SLC35E1Q96K37 410 aa18.63■□□□□ 0.57
VEGFA-209ENST00000425836 DEDDO75618 318 aa18.62■□□□□ 0.57
VEGFA-209ENST00000425836 OR10J1P30954 320 aa18.62■□□□□ 0.57
VEGFA-209ENST00000425836 TIGITQ495A1 244 aa18.62■□□□□ 0.57
VEGFA-209ENST00000425836 LRRC37A5PQ49AS3 106 aa18.62■□□□□ 0.57
VEGFA-209ENST00000425836 OR8G2PQ6IF36 304 aa18.62■□□□□ 0.57
VEGFA-209ENST00000425836 ADAMTSL5Q6ZMM2 481 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms