RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 A0A1W2PRE2 83 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 E7EUB6 86 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 SLAQ13239 276 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 C2orf83Q53S99 150 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 OR10J3Q5JRS4 329 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF439Q8NDP4 499 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 TSKUQ8WUA8 353 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 SSBP4Q9BWG4 385 aaPredicted RBP6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 RPUSD1Q9UJJ7 312 aaKnown RBP6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF257Q9Y2Q1 563 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 PTPRBP23467 1997 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 COL27A1Q8IZC6 1860 aaPredicted RBP6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 ZFHX2Q9C0A1 2572 aaPredicted RBP6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 M0R296 226 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 CCL3L1P16619 93 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 PLA2G2CQ5R387 149 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 PAXXQ9BUH6 204 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 MGAQ8IWI9 3026 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 IZUMO1RA6ND01 250 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 HSBP1O75506 76 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 IGHV1-46P01743 117 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 APOA2P02652 100 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 REG1AP05451 166 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 APELAP0DMC3 54 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 ORM2P19652 201 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 RPL8P62917 257 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 GNG5P63218 68 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 FAM27E3Q08E93 113 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 POU2AF1Q16633 256 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 DMRTA1Q5VZB9 504 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 Q8N976 141 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 OR5B3Q8NH48 314 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC25A2Q9BXI2 301 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 LAMA5O15230 3695 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 NAV3Q8IVL0 2385 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SPAARA0A1B0GVQ0 90 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 A0A1B0GWJ7 208 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SMIM27A0A1W2PRY6 76 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 hADV38S2A0JD32 116 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 FNDC10F2Z333 226 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 TNXAQ16473 311 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 TIMM23BQ5SRD1 257 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 COL5A1-AS1Q5SY13 56 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 STUMQ69YW2 141 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC25A48Q6ZT89 311 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 C11orf42Q8N5U0 333 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 RBMXL3Q8N7X1 1067 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 OR1L8Q8NGR8 309 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 H1FXQ92522 213 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 FAM167A-AS1Q96KT0 104 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 IGF2BP2-AS1Q96M15 143 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SMG1Q96Q15 3661 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 SPENQ96T58 3664 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 IGHV3-21A0A0B4J1V1 117 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 H3BTX0 84 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 TNFSF4P23510 183 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 PRRX1P54821 245 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 COX19Q49B96 90 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 Q56UQ5 140 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 RNASEKQ6P5S7 137 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 NIT1Q86X76 327 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 FLYWCH2Q96CP2 140 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 C19orf24Q9BVV8 132 aa6.11□□□□□ -1.43
SMARCC1-202ENST00000425518 CORTO00230 105 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF788Q6ZQV5 615 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 DEFB124Q8NES8 71 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 NUP35Q8NFH5 326 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 CLEC7AQ9BXN2 247 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 BET1LQ9NYM9 111 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 ARL2-SNX15V9GYD0 113 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 DCHS1Q96JQ0 3298 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 A0A1W2PN81 502 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 SIAH2O43255 324 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 ENSAO43768 121 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 HYPMO75409 117 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 TBR1Q16650 682 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 HCP5Q6MZN7 132 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 SPACA3Q8IXA5 215 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 OR10X1Q8NGY0 326 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 C18orf32Q8TCD1 76 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 FNDC4Q9H6D8 234 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 M0R2Z0 102 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 PEX7O00628 323 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 TCF21O43680 179 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 IGLC2P0DOY2 106 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 HINT1P49773 126 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms