RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SEC22AQ96IW7 307 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ANKRD65E5RJM6 399 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 K7EQG2 157 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 GSTZ1O43708 216 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 CLN5O75503 358 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 APOHP02749 345 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 NAT1P18440 290 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 CRYBB3P26998 211 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 HRH1P35367 487 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TAS2R20P59543 309 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ETFRF1Q6IPR1 90 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 NOXA1Q86UR1 476 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SAMD12Q8N8I0 201 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 MRGPRFQ96AM1 343 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 FAM210BQ96KR6 192 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RAB40CQ96S21 281 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 CACFD1Q9UGQ2 172 aa8.9□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SMIM9A6NGZ8 99 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 KNCNA6PVL3 124 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RPL5P46777 297 aaKnown RBP8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 LGALS9BQ3B8N2 356 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 CCDC71LQ8N9Z2 235 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 OR4X1Q8NH49 305 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ZFAND1Q8TCF1 268 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SCPEP1Q9HB40 452 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SEPSECSQ9HD40 501 aaKnown RBP8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ALMS1Q8TCU4 4167 aa8.89□□□□□ -0.99
HLA-DQB3-203ENST00000425319 DBX1A6NMT0 343 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 INS-IGF2F8WCM5 200 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 M0R2N4 97 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 B3GALNT1O75752 331 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 AMBPP02760 352 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 HNRNPCP07910 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SLC25A4P12235 298 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RCVRNP35243 200 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 NUP62P37198 522 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ID1P41134 155 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 HTR2BP41595 481 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 PSMG4Q5JS54 123 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 LILRB2Q8N423 598 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 CLEC5AQ9NY25 188 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 COPZ2Q9P299 210 aa8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 PLECQ15149 4684 aaKnown RBP8.88□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 A0A1B0GU03 582 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 LYSMD2Q8IV50 215 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 OR1S2Q8NGQ3 325 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RNF167Q9H6Y7 350 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ANAPC10Q9UM13 185 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 X6R8D5 127 aa8.87□□□□□ -0.99
HLA-DQB3-203ENST00000425319 C3orf85A0A1B0GTC6 90 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ETV6P41212 452 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 NEDD8Q15843 81 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 C12orf74Q32Q52 190 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SPINK9Q5DT21 86 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 FAM219AQ8IW50 185 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 FAM24BQ8N5W8 94 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 XCL2Q9UBD3 114 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 TMED3Q9Y3Q3 217 aa8.86□□□□□ -0.99
HLA-DQB3-203ENST00000425319 PPP5CP53041 499 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 PIGPP57054 158 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SPCS3P61009 180 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RND3P61587 244 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RNF212Q495C1 297 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RNASE10Q5GAN6 216 aaKnown RBP8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 DCANP1Q8TF63 244 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 NEU1Q99519 415 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 NRN1Q9NPD7 142 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 COMMD3Q9UBI1 195 aa8.85□□□□□ -0.99
HLA-DQB3-203ENST00000425319 IGHV3OR16-12A0A075B7B8 117 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 TNFAIP8O95379 198 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 APOA1P02647 267 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 FABP1P07148 127 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RD3LP0DJH9 198 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 EMP1P54849 157 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 TIGITQ495A1 244 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SPATA31B1PQ5VZV4 182 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 MZT2AQ6P582 158 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 C16orf54Q6UWD8 224 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ZNF767PQ75MW2 155 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 SNX29P2Q8IUI4 249 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 ARRDC1Q8N5I2 433 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 C7orf50Q9BRJ6 194 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms