RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 DOPEY1Q5JWR5 2465 aa8.67□□□□□ -1.02
CUX1-205ENST00000425244 A6NNC1 897 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 SLC17A3O00476 420 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 APOA2P02652 100 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 CD99P14209 185 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 APOBEC3AP31941 199 aaPredicted RBP8.66□□□□□ -1.02
CUX1-205ENST00000425244 PRR20EP86478 221 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 PRR20CP86479 221 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 PRR20DP86480 221 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 PRR20BP86481 221 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 PRR20AP86496 221 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 OR10G8Q8NGN5 311 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 OR10X1Q8NGY0 326 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 OR9G1Q8NH87 305 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 ACY3Q96HD9 319 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 COMMD5Q9GZQ3 224 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 NAV3Q8IVL0 2385 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 UBR5O95071 2799 aaPredicted RBP8.66□□□□□ -1.02
CUX1-205ENST00000425244 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 A0A1B0GUS0 222 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 ZNF705GA8MUZ8 300 aaPredicted RBP8.66□□□□□ -1.02
CUX1-205ENST00000425244 TYMSP04818 313 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
CUX1-205ENST00000425244 OR10J4P0C629 311 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 LINC00869P0C866 280 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 LCN2P80188 198 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 HLA-DRB5Q30154 266 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 CORO2AQ92828 525 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
CUX1-205ENST00000425244 IGHV3-48P01763 117 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 CNN1P51911 297 aaKnown RBP8.65□□□□□ -1.02
CUX1-205ENST00000425244 ZNF90Q03938 601 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 DIAPH2-AS1Q14236 149 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 TMEM200BQ69YZ2 307 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 TEX38Q6PEX7 206 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 ZNF257Q9Y2Q1 563 aa8.65□□□□□ -1.02
CUX1-205ENST00000425244 PPIAL4EA0A075B759 164 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 PPIAL4DF5H284 164 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 LYNX1G3V0Z9 82 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 K7EN84 100 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 TCF21O43680 179 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 LY6HO94772 140 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 LYNX1P0DP58 116 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 C10orf55Q5SWW7 151 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 LYPD2Q6UXB3 125 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 TMEM144Q7Z5S9 345 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 MRPL41Q8IXM3 137 aaKnown RBP8.65□□□□□ -1.03
CUX1-205ENST00000425244 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 PPIAL4AQ9Y536 164 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 PLXNB1O43157 2135 aa8.65□□□□□ -1.03
CUX1-205ENST00000425244 CRYBB3P26998 211 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 OR5I1Q13606 314 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 JOSD1Q15040 202 aaPredicted RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 ZNF672Q499Z4 452 aaPredicted RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 ZNF833PQ6ZTB9 187 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 OR5B3Q8NH48 314 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 OR2T6Q8NHC8 308 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 FLYWCH2Q96CP2 140 aaKnown RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 FKBP11Q9NYL4 201 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 H0YJW9 148 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 FCN3O75636 299 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 GZMBP10144 247 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 RPL15P61313 204 aaKnown RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 RPL8P62917 257 aaKnown RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
CUX1-205ENST00000425244 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
CUX1-205ENST00000425244 ABCA1O95477 2261 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 NDUFB3O43676 98 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 CBLN1P23435 193 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 BMI1P35226 326 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 ERVFC1-1P60608 527 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 PRB3Q04118 309 aaPredicted RBP8.63□□□□□ -1.03
CUX1-205ENST00000425244 FOXL1Q12952 345 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 TMEM30BQ3MIR4 351 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 CENPWQ5EE01 88 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 OSR1Q8TAX0 266 aaPredicted RBP8.63□□□□□ -1.03
CUX1-205ENST00000425244 TMEM18Q96B42 140 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 IMMP2LQ96T52 175 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 TECRQ9NZ01 308 aaKnown RBP8.63□□□□□ -1.03
CUX1-205ENST00000425244 A0A1W2PPR1 153 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 GRIFINA4D1Z8 144 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 E7EUB6 86 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 DVL1O14640 695 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 GNG4P50150 75 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 ERHP84090 104 aaKnown RBP8.63□□□□□ -1.03
CUX1-205ENST00000425244 MEF2CQ06413 473 aaPredicted RBP8.63□□□□□ -1.03
CUX1-205ENST00000425244 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 LRRC10Q5BKY1 277 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 UBTD1Q9HAC8 227 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 703.4 ms