RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 NAP1L6A6NFF2 107 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 ZNF207O43670 478 aaKnown RBP13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 TNFRSF9Q07011 255 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 PPP1R1AQ13522 171 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 SMCO1Q147U7 214 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 RBMS2Q15434 407 aaKnown RBP13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 TRIQKQ629K1 86 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 HEYLQ9NQ87 328 aaPredicted RBP13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 HSPB7Q9UBY9 170 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 SMPXQ9UHP9 88 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 STAB2Q8WWQ8 2551 aa13.41□□□□□ -0.26
IGHV3-47-201ENST00000425060 A0A1B0GU03 582 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 CEBPZOSA8MTT3 80 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 PITX3O75364 302 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 CLN5O75503 358 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 NXPH3O95157 252 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 SFT2D2O95562 160 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 HAGHQ16775 308 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 CENPSQ8N2Z9 138 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 DEFB125Q8N687 156 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 TUBA4BQ9H853 241 aa13.4□□□□□ -0.26
IGHV3-47-201ENST00000425060 PIGBOS1A0A0B4J2F0 54 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 OR11H12B2RN74 326 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 TSPAN4O14817 238 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 NDUFB6O95139 128 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 IL7P13232 177 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 VAMP1P23763 118 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 BTCP35070 178 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 OPRK1P41145 380 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 TENM3Q9P273 2699 aa13.39□□□□□ -0.27
IGHV3-47-201ENST00000425060 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 CHEK1O14757 476 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 YIF1AO95070 293 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 INPP1P49441 399 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 UBE2MP61081 183 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 ZNF600Q6ZNG1 722 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 SLC16A13Q7RTY0 426 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 OR52B4Q8NGK2 314 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 C7orf50Q9BRJ6 194 aaKnown RBP13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 RBKSQ9H477 322 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 ZMAT4Q9H898 229 aa13.38□□□□□ -0.27
IGHV3-47-201ENST00000425060 TRAV14DV4A0A0A6YYC5 116 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 IGKV1-17P01599 117 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 SLC25A6P12236 298 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 LAMTOR1Q6IAA8 161 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 PRSS54Q6PEW0 395 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 TMEM116Q8NCL8 245 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 DTD1Q8TEA8 209 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 RNF2Q99496 336 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 SRD5A3Q9H8P0 318 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 PUS1Q9Y606 427 aaKnown RBP eCLIP13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 U3KQ87 197 aa13.37□□□□□ -0.27
IGHV3-47-201ENST00000425060 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 RPS10-NUDT3A0A1W2PQS6 291 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 PLA2G10O15496 165 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 NPY1RP25929 384 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 OR1S1Q8NH92 325 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
IGHV3-47-201ENST00000425060 C9orf170A2RU37 121 aa13.35□□□□□ -0.27
IGHV3-47-201ENST00000425060 SLC25A4P12235 298 aa13.35□□□□□ -0.27
IGHV3-47-201ENST00000425060 NOXA1Q86UR1 476 aa13.35□□□□□ -0.27
IGHV3-47-201ENST00000425060 CITED4Q96RK1 184 aa13.35□□□□□ -0.27
IGHV3-47-201ENST00000425060 GINS3Q9BRX5 216 aa13.35□□□□□ -0.27
IGHV3-47-201ENST00000425060 TRAV30A0A087WSZ9 112 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 IGHV3-49A0A0A0MS15 119 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 A6NHS1 94 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 FAM90A26D6RGX4 464 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 IFNA10P01566 189 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 IGLC1P0CG04 106 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 RND2P52198 227 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 TIGITQ495A1 244 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 LINC00299Q6ZSB3 139 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 LILRB2Q8N423 598 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 DNAH7Q8WXX0 4024 aa13.34□□□□□ -0.27
IGHV3-47-201ENST00000425060 IGHV3OR16-13A0A075B7E8 117 aa13.33□□□□□ -0.28
IGHV3-47-201ENST00000425060 IGHV3-74A0A0B4J1X5 117 aa13.33□□□□□ -0.28
IGHV3-47-201ENST00000425060 CENPXA8MT69 81 aa13.33□□□□□ -0.28
IGHV3-47-201ENST00000425060 HOXB5P09067 269 aa13.33□□□□□ -0.28
IGHV3-47-201ENST00000425060 GGNBP1Q5YKI7 109 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms