RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PDCD10Q9BUL8 212 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 MCUBQ9NWR8 336 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
SPC24-201ENST00000423327 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 SPCS3P61009 180 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 SCP2D1Q9UJQ7 156 aa11.5□□□□□ -0.57
SPC24-201ENST00000423327 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 A0A1B0GU03 582 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 YIF1AO95070 293 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 NXPH3O95157 252 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 TMEM50AO95807 157 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
SPC24-201ENST00000423327 ANKRD55Q3KP44 614 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 LILRB2Q8N423 598 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
SPC24-201ENST00000423327 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
SPC24-201ENST00000423327 CORTO00230 105 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 LYL1P12980 280 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 AKR1C4P17516 323 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 NPBWR1P48145 328 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 PYDC2Q56P42 97 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 ST8SIA2Q92186 375 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 GGTLC1Q9BX51 225 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
SPC24-201ENST00000423327 PUS1Q9Y606 427 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPC24-201ENST00000423327 ZNF701M0R085 212 aaPredicted RBP11.47□□□□□ -0.57
SPC24-201ENST00000423327 CLN5O75503 358 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 OPRK1P41145 380 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 SUB1P53999 127 aaKnown RBP eCLIP11.47□□□□□ -0.57
SPC24-201ENST00000423327 C2orf83Q53S99 150 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 LAMTOR1Q6IAA8 161 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 ZNF600Q6ZNG1 722 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 TOMM5Q8N4H5 51 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 OR4X1Q8NH49 305 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 SRRQ9GZT4 340 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
SPC24-201ENST00000423327 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
SPC24-201ENST00000423327 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 A0A0B4J2A0 478 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 HTR2BP41595 481 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 PLECQ15149 4684 aaKnown RBP11.46□□□□□ -0.57
SPC24-201ENST00000423327 ZNF124Q15973 351 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 SLC24A4Q8NFF2 622 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 SCGB3A2Q96PL1 93 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 SHPKQ9UHJ6 478 aa11.46□□□□□ -0.57
SPC24-201ENST00000423327 HYDINQ4G0P3 5121 aa11.46□□□□□ -0.58
SPC24-201ENST00000423327 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 TIGITQ495A1 244 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
SPC24-201ENST00000423327 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
SPC24-201ENST00000423327 IGLC1P0CG04 106 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 S100A5P33763 92 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 FAUP35544 74 aaKnown RBP11.44□□□□□ -0.58
SPC24-201ENST00000423327 TFPI2P48307 235 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 AP3S2P59780 193 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 SMCO1Q147U7 214 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 TMED4Q7Z7H5 227 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 SDHCQ99643 169 aaPredicted RBP11.44□□□□□ -0.58
SPC24-201ENST00000423327 GINS3Q9BRX5 216 aa11.44□□□□□ -0.58
SPC24-201ENST00000423327 DFFBO76075 338 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 NPY1RP25929 384 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 CCR6P51684 374 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 RND2P52198 227 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 BAK1Q16611 211 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 TMEM128Q5BJH2 165 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 LGI3Q8N145 548 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
SPC24-201ENST00000423327 RBKSQ9H477 322 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
SPC24-201ENST00000423327 ALMS1Q8TCU4 4167 aa11.42□□□□□ -0.58
SPC24-201ENST00000423327 PITX3O75364 302 aa11.42□□□□□ -0.58
SPC24-201ENST00000423327 CRYBB3P26998 211 aa11.42□□□□□ -0.58
SPC24-201ENST00000423327 PPP1R1AQ13522 171 aa11.42□□□□□ -0.58
SPC24-201ENST00000423327 DTD1Q8TEA8 209 aa11.42□□□□□ -0.58
SPC24-201ENST00000423327 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms