RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
UBXN11-208ENST00000421827 HIPK2Q9H2X6 1198 aa13.5□□□□□ -0.25
UBXN11-208ENST00000421827 HEYLQ9NQ87 328 aaPredicted RBP13.5□□□□□ -0.25
UBXN11-208ENST00000421827 PRR13Q9NZ81 148 aa13.5□□□□□ -0.25
UBXN11-208ENST00000421827 HTR2BP41595 481 aa13.49□□□□□ -0.25
UBXN11-208ENST00000421827 SUPT4H1P63272 117 aaKnown RBP13.49□□□□□ -0.25
UBXN11-208ENST00000421827 TMEM116Q8NCL8 245 aa13.49□□□□□ -0.25
UBXN11-208ENST00000421827 TRAV14DV4A0A0A6YYC5 116 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 CEBPZOSA8MTT3 80 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 CHEK1O14757 476 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 TMEM50AO95807 157 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 SULT1A3P0DMM9 295 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 SULT1A4P0DMN0 295 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 ANXA3P12429 323 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 OPRK1P41145 380 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 TOMM20LQ6UXN7 152 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 FNDC4Q9H6D8 234 aaPredicted RBP13.48□□□□□ -0.25
UBXN11-208ENST00000421827 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 RETNQ9HD89 108 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 CACFD1Q9UGQ2 172 aa13.48□□□□□ -0.25
UBXN11-208ENST00000421827 A0A0B4J2A0 478 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 SRPXP78539 464 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 MLANAQ16655 118 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 LYZL2Q7Z4W2 148 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 LGI3Q8N145 548 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 RNF2Q99496 336 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 GINS3Q9BRX5 216 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 SHPKQ9UHJ6 478 aa13.47□□□□□ -0.25
UBXN11-208ENST00000421827 IGHV3-49A0A0A0MS15 119 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 OR4C46A6NHA9 309 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 CLN5O75503 358 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 LYL1P12980 280 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 CCR6P51684 374 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 NMSQ5H8A3 153 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 GGTLC1Q9BX51 225 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
UBXN11-208ENST00000421827 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.25
UBXN11-208ENST00000421827 PUS1Q9Y606 427 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBXN11-208ENST00000421827 IGHV3OR16-13A0A075B7E8 117 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 LOC102724200A0A096LPH7 203 aaPredicted RBP13.45□□□□□ -0.26
UBXN11-208ENST00000421827 IGHV3-74A0A0B4J1X5 117 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 RPS10-NUDT3A0A1W2PQS6 291 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 SCGB2A1O75556 95 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 NXPH3O95157 252 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 SMCO1Q147U7 214 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 TMEM128Q5BJH2 165 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 CASC10Q5T4H9 136 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 SLC24A4Q8NFF2 622 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 SLC25A21Q9BQT8 299 aaPredicted RBP13.45□□□□□ -0.26
UBXN11-208ENST00000421827 SRRQ9GZT4 340 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
UBXN11-208ENST00000421827 PIGBOS1A0A0B4J2F0 54 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 A0A1B0GU03 582 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 BMI1P35226 326 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 TNFRSF9Q07011 255 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 ODF3L2Q3SX64 289 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
UBXN11-208ENST00000421827 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
UBXN11-208ENST00000421827 SLC25A4P12235 298 aa13.43□□□□□ -0.26
UBXN11-208ENST00000421827 NPY1RP25929 384 aa13.43□□□□□ -0.26
UBXN11-208ENST00000421827 NOXA1Q86UR1 476 aa13.43□□□□□ -0.26
UBXN11-208ENST00000421827 TMEM170AQ8WVE7 144 aa13.43□□□□□ -0.26
UBXN11-208ENST00000421827 VSIRQ9H7M9 311 aa13.43□□□□□ -0.26
UBXN11-208ENST00000421827 RYR3Q15413 4870 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 CD5P06127 495 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 FAM90A2PQ658T7 463 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 PRSS54Q6PEW0 395 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 OR1S1Q8NH92 325 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 DTD1Q8TEA8 209 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 ST8SIA2Q92186 375 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 RBKSQ9H477 322 aa13.42□□□□□ -0.26
UBXN11-208ENST00000421827 IGKV3-7A0A075B6H7 116 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 IFNA10P01566 189 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 APOHP02749 345 aaPredicted RBP13.41□□□□□ -0.26
UBXN11-208ENST00000421827 VAMP1P23763 118 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 TFPI2P48307 235 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 INPP1P49441 399 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 RND2P52198 227 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 TIGITQ495A1 244 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 LRTM2Q8N967 370 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 U3KQ87 197 aa13.41□□□□□ -0.26
UBXN11-208ENST00000421827 SFT2D2O95562 160 aa13.4□□□□□ -0.26
UBXN11-208ENST00000421827 NPPCP23582 126 aa13.4□□□□□ -0.26
UBXN11-208ENST00000421827 CMC4P56277 68 aaPredicted RBP13.4□□□□□ -0.26
UBXN11-208ENST00000421827 PAFAH1B2P68402 229 aa13.4□□□□□ -0.26
UBXN11-208ENST00000421827 RBMS2Q15434 407 aaKnown RBP13.4□□□□□ -0.26
UBXN11-208ENST00000421827 BAK1Q16611 211 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms