RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 NKX2-1P43699 371 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-202ENST00000421712 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
BRAT1-202ENST00000421712 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 RNASEH2CQ8TDP1 164 aaKnown RBP12.02□□□□□ -0.49
BRAT1-202ENST00000421712 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 CHRDL1Q9BU40 450 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 PALMDQ9NP74 551 aa12.02□□□□□ -0.49
BRAT1-202ENST00000421712 AURKAIP1Q9NWT8 199 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-202ENST00000421712 F8W735 103 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-202ENST00000421712 LGALS9O00182 355 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 SCGB2A1O75556 95 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 YIF1AO95070 293 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 CSN3P07498 182 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 CTSGP08311 255 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 POLR2GP62487 172 aaKnown RBP eCLIP12.01□□□□□ -0.49
BRAT1-202ENST00000421712 RAB11AP62491 216 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 ID3Q02535 119 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-202ENST00000421712 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 REC114Q7Z4M0 266 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-202ENST00000421712 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 C20orf24Q9BUV8 137 aa12.01□□□□□ -0.49
BRAT1-202ENST00000421712 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-202ENST00000421712 NOTCH1P46531 2555 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 C2orf70A6NJV1 201 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 WIPF1O43516 503 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 PRAF2O60831 178 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
BRAT1-202ENST00000421712 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
BRAT1-202ENST00000421712 SPANXN5Q5MJ07 72 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 UNQ9165/PRO28630Q6UXU0 137 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 OR4D5Q8NGN0 318 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 UFC1Q9Y3C8 167 aa12□□□□□ -0.49
BRAT1-202ENST00000421712 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 NDUFA4O00483 81 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 SSSCA1O60232 199 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 TMEM50AO95807 157 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 SLC25A4P12235 298 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 FOLR2P14207 255 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 ADMP35318 185 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 TM4SF20Q53R12 229 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 GSG1LQ6UXU4 331 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 PRR25Q96S07 402 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 MARVELD1Q9BSK0 173 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
BRAT1-202ENST00000421712 PSENENQ9NZ42 101 aa11.99□□□□□ -0.49
BRAT1-202ENST00000421712 ZNF256Q9Y2P7 627 aaPredicted RBP11.99□□□□□ -0.49
BRAT1-202ENST00000421712 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 H3BP45 60 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 ZNF207O43670 478 aaKnown RBP11.98□□□□□ -0.49
BRAT1-202ENST00000421712 CLN5O75503 358 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 SPNP16150 400 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 EDN2P20800 178 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 CBLN1P23435 193 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 RND2P52198 227 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 C2orf50Q96LR7 162 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 SIGLEC8Q9NYZ4 499 aa11.98□□□□□ -0.49
BRAT1-202ENST00000421712 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
BRAT1-202ENST00000421712 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
BRAT1-202ENST00000421712 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 WI2-2373I1.2A0A1W2PRP0 233 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 IGLV1-51P01701 117 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 CD69Q07108 199 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 DCTN2Q13561 401 aaKnown RBP11.97□□□□□ -0.49
BRAT1-202ENST00000421712 PRSS54Q6PEW0 395 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 SLC16A13Q7RTY0 426 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 CACNG8Q8WXS5 425 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 NPIPB3Q92617 1050 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 LSM5Q9Y4Y9 91 aaKnown RBP11.97□□□□□ -0.49
BRAT1-202ENST00000421712 SELENOKQ9Y6D0 94 aa11.97□□□□□ -0.49
BRAT1-202ENST00000421712 SORL1Q92673 2214 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 TMEM213A2RRL7 107 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 A8MWP6 167 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 L7N2F9 121 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 GOSR2O14653 212 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 SSNA1O43805 119 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 PTTG1O95997 202 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 MBPP02686 304 aaPredicted RBP11.96□□□□□ -0.49
BRAT1-202ENST00000421712 OR10J1P30954 320 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 GPX4P36969 197 aaPredicted RBP11.96□□□□□ -0.49
BRAT1-202ENST00000421712 ELLP55199 621 aaPredicted RBP11.96□□□□□ -0.49
BRAT1-202ENST00000421712 VAMP2P63027 116 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 SLC35E1Q96K37 410 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 RAB40CQ96S21 281 aa11.96□□□□□ -0.49
BRAT1-202ENST00000421712 GP9P14770 177 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 S100A10P60903 97 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 TIGITQ495A1 244 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 CD300EQ496F6 205 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms