RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 SMIM18P0DKX4 95 aa13.85□□□□□ -0.19
VARS2-202ENST00000421263 TAS2R19P59542 299 aa13.85□□□□□ -0.19
VARS2-202ENST00000421263 Q6ZRM9 215 aa13.85□□□□□ -0.19
VARS2-202ENST00000421263 OR13C8Q8NGS7 320 aa13.85□□□□□ -0.19
VARS2-202ENST00000421263 PHLDA1Q8WV24 401 aaPredicted RBP13.85□□□□□ -0.19
VARS2-202ENST00000421263 COPZ2Q9P299 210 aa13.85□□□□□ -0.19
VARS2-202ENST00000421263 CDS2O95674 445 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 PPP5CP53041 499 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 CCDC71LQ8N9Z2 235 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 MARCH1Q8TCQ1 289 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 MIXL1Q9H2W2 232 aa13.84□□□□□ -0.19
VARS2-202ENST00000421263 FRAS1Q86XX4 4008 aa13.83□□□□□ -0.19
VARS2-202ENST00000421263 GABARAPH6UMI1 98 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 DNASE2O00115 360 aaPredicted RBP13.83□□□□□ -0.2
VARS2-202ENST00000421263 RAB3DO95716 219 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 NPPCP23582 126 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 CRYBB3P26998 211 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 DEFB131AP59861 70 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 SSBP1Q04837 148 aaKnown RBP13.83□□□□□ -0.2
VARS2-202ENST00000421263 TRIM16LQ309B1 348 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 STEAP1BQ6NZ63 245 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 OR11H2Q8NH07 326 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 OR52E5Q8NH55 327 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 GLYATL2Q8WU03 294 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 RRNAD1Q96FB5 475 aaKnown RBP13.83□□□□□ -0.2
VARS2-202ENST00000421263 RTBDNQ9BSG5 229 aaPredicted RBP13.83□□□□□ -0.2
VARS2-202ENST00000421263 TMEM222Q9H0R3 208 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 C11orf68Q9H3H3 251 aaKnown RBP13.83□□□□□ -0.2
VARS2-202ENST00000421263 DNAH10Q8IVF4 4471 aa13.83□□□□□ -0.2
VARS2-202ENST00000421263 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 SPCS3P61009 180 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 SCGB2B2Q4G0G5 96 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 GPR107Q5VW38 600 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 FAM219AQ8IW50 185 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 TMEM231Q9H6L2 316 aa13.82□□□□□ -0.2
VARS2-202ENST00000421263 TEX13DA0A0J9YY54 714 aaPredicted RBP13.81□□□□□ -0.2
VARS2-202ENST00000421263 A0A1W2PS18 150 aa13.81□□□□□ -0.2
VARS2-202ENST00000421263 IGKV1-17P01599 117 aa13.81□□□□□ -0.2
VARS2-202ENST00000421263 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
VARS2-202ENST00000421263 LEMD1Q68G75 181 aa13.81□□□□□ -0.2
VARS2-202ENST00000421263 LHFPL5Q8TAF8 219 aa13.81□□□□□ -0.2
VARS2-202ENST00000421263 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
VARS2-202ENST00000421263 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.81□□□□□ -0.2
VARS2-202ENST00000421263 TRAV30A0A087WSZ9 112 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 K7EQG2 157 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 CTDSP2O14595 271 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
VARS2-202ENST00000421263 OPRK1P41145 380 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
VARS2-202ENST00000421263 MRPS10P82664 201 aaKnown RBP13.8□□□□□ -0.2
VARS2-202ENST00000421263 SURF2Q15527 256 aaPredicted RBP13.8□□□□□ -0.2
VARS2-202ENST00000421263 LGALS9CQ6DKI2 356 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 C11orf45Q8TAV5 145 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 GPR132Q9UNW8 380 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 U3KQE9 123 aa13.8□□□□□ -0.2
VARS2-202ENST00000421263 GIG44P09565 113 aaPredicted RBP13.79□□□□□ -0.2
VARS2-202ENST00000421263 OR5AC1P0C628 307 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 HTR2BP41595 481 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 TMEM187Q14656 261 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 MEF2DQ14814 521 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 C2orf83Q53S99 150 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 SELENOHQ8IZQ5 122 aaKnown RBP13.79□□□□□ -0.2
VARS2-202ENST00000421263 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
VARS2-202ENST00000421263 TMEM230Q96A57 120 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 GRAMD2BQ96HH9 432 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 METTL26Q96S19 204 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 NAA60Q9H7X0 242 aa13.79□□□□□ -0.2
VARS2-202ENST00000421263 ALDH3B2P48448 385 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 NANOS2P60321 138 aaKnown RBP13.78□□□□□ -0.2
VARS2-202ENST00000421263 DHODHQ02127 395 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 TIGITQ495A1 244 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 FAAP20Q6NZ36 180 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 DCANP1Q8TF63 244 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 GPR146Q96CH1 333 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
VARS2-202ENST00000421263 C14orf166Q9Y224 244 aaKnown RBP13.78□□□□□ -0.2
VARS2-202ENST00000421263 CTDSPLO15194 276 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 SCGB2A1O75556 95 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 P2RY1P47900 373 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 RBMS2Q15434 407 aaKnown RBP13.77□□□□□ -0.21
VARS2-202ENST00000421263 PRSS54Q6PEW0 395 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.21
VARS2-202ENST00000421263 STHQ8IWL8 128 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 RPP25LQ8N5L8 163 aaKnown RBP13.77□□□□□ -0.21
VARS2-202ENST00000421263 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
VARS2-202ENST00000421263 SMIM4Q8WVI0 70 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 TMEM56-RWDD3S4R434 201 aa13.77□□□□□ -0.21
VARS2-202ENST00000421263 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 DISC1C4P0D8 188 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 RGS5O15539 181 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 IGLC1P0CG04 106 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 YPEL3P61236 119 aaPredicted RBP13.76□□□□□ -0.21
VARS2-202ENST00000421263 SPCS2Q15005 226 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 OR1S2Q8NGQ3 325 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms